Category Archives: Plant Root Soil microbiome

October 24, 2018

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Today’s digest is full of REALLY cool science and features including a 3D image of the human lung microbiome and metabolome, how gut microbiome of wild mice promotes fitness, and an interesting perspective piece on how environmental filtering applies to microbiomes.

General microbiome

Environmental Filtering Is a Relic. A Response to Cadotte and Tucker.

Aguilar-Trigueros CA- Trends in Ecology and Evolution

Gut microbiome

The Leaky Gut and Altered Microbiome in Chronic Kidney Disease.

Lau WL- Journal of Renal Nutrition

Linking the Gut Microbial Ecosystem with the Environment: Does Gut Health Depend on Where We Live?

Tasnim N- Frontiers in Microbiology

Skin microbiome

High-Altitude Living Shapes the Skin Microbiome in Humans and Pigs.

Zeng B- Frontiers in Microbiology

Lung microbiome

Three-Dimensional Microbiome and Metabolome Cartography of a Diseased Human Lung

Garg N- Cell Host and Microbe

Animal microbiome

Wild Mouse Gut Microbiota Promotes Host Fitness and Improves Disease Resistance

Rosshart SP- Cell

Plant and soil microbiome

Soil bacterial community mediates the effect of plant material on methanogenic decomposition of soil organic matter

Yuan Q- Soil Biology and Biochemistry

Bacterial communities in soil become sensitive to drought under intensive grazing

Jurburg SD- Science of the Total Environment

Prokaryotic Community Distribution along an Ecological Gradient of Salinity in Surface and Subsurface Saline Soils.

Xie K- Scientific reports

Marine and inland water microbiome

Transcriptional activities of the microbial consortium living with the marine nitrogen-fixing cyanobacterium Trichodesmium reveal potential roles in community-level nitrogen cycling

Lee MD-Applied and Environmental Microbiology

Dynamic microbial populations along the Cuyahoga River.

Cannon MV-  PloS one

Preprint

High degree of virulence gene diversity in Streptococcus pyogenes isolated in Central Italy

Bencardino D- BioRxiv

Microbiome News

I Wish I’d Known This Before I Gave Birth

-mindbodygreen.com

October 22, 2017

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A wide range of interesting articles today on the mouth, respiratory and gut microbiomes: Airway microbiota and obstruction in asthma, the tongue microbiome and pneumonia in the elderly, gut microbiome interactions with host G-protein coupled receptors, the effects of prebiotics and milk oligosaccharides on the mouse gut metabolome and stressor induced immune alterations, the impact of social stress on the gut microbiome and the host gut transcriptome, the impact of a Bacteroides integrase in a mouse model of colitis, and evidence that oral bacteria can colonize the gut in genetically and dysbiotic susceptible mice, leading to increased gut inflammation. 

  • Events and jobs

Postdoctoral Researcher in Microbiome Bioinformatics – Karolinska Institutet

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  • Human respiratory microbiome

Different Functional Genes of Upper Airway Microbiome Associated with Natural Course of Childhood Asthma – Bong-Soo Kim – European Journal of Allergy and Clinical Immunology

*Atopic asthmatic immune phenotypes associated with airway microbiota and airway obstruction – Benjamin A. Turturice – PLOSone

  • Human oral microbiome

*Relationships of variations in the tongue microbiota and pneumonia mortality in nursing home residents – Shinya Kageyama – Journal of Gerontology

  • Human gut microbiome

Review: Host-Microbe Interactions: Aiming at GPCRs – Mirella Bucci – Nature Chemical Biology

Development of severe bronchopulmonary dysplasia is associated with alterations in fecal volatile organic compounds – Daniel J C Berkhout – Pediatric Research

Gut Fermentation of Dietary Fibres: Physico-Chemistry of Plant Cell Walls and Implications for Health – Barbara A. Williams – International Journal of Molecular Sciences

Review: Food allergy: The influence of breast-feeding and gut microbiota – S. Hazebrouck – Revue Française d’Allergologie

Review: Whole cereal grains and potential health effects: Involvement of the gut microbiota – Lingxiao Gong – Food Research International

Review: Probiotic strains and mechanistic insights for the treatment of type 2 diabetes – Christiane S. Hampe – Endocrine

Review: Early-Life Gut Dysbiosis: A Driver of Later-Life Fibrosis? – Karen J. Ho – Journal of Investigative Dermatology

Review: Nutritional programming by glucocorticoids in breast milk: targets, mechanisms and possible implications – Jonneke J. Hollanders – Best Practice & Research Clinical Endocrinology & Metabolism

Review: Less Invasive Screening for Colorectal Cancer by Microbiota Analysis: Is it a Reality or an Illusion? – Hisashi Onodera – EBioMedicine

  • Fecal Transplants

The taxonomic composition of the donor intestinal microbiota is a major factor influencing the efficacy of faecal microbiota transplantation in therapy refractory ulcerative colitis – P. Kump – Alimentary Pharamacology and Therapeutics

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  • Animal experiments

* Ectopic colonization of oral bacteria in the intestine drives TH1 cell induction and inflammation – Koji Atarashi – Science

*Stressor-induced immunomodulation is attenuated by prebiotics and milk oligosaccharides: Role of the colonic metabolome – M. Bailey – Brain, Behavior, and Immunity

*The colonic epithelial transcriptome and intestinal microbiome are significantly changed by social stressor exposure – A.R. Mackos – Brain, Behavior, and Immunity

*A Gut Microbial Mimic that Hijacks Diabetogenic Autoreactivity to Suppress Colitis – Roopa Hebbandi Nanjundappa – Cell

Metformin Alters Upper Small Intestinal Microbiota that Impact a Glucose-SGLT1-Sensing Glucoregulatory Pathway – Paige V. Bauer – Cell Metabolism

Distribution of species and antimicrobial resistance among enterococci isolated from the fecal microbiota – Andréa de Andrade Rangel de Freitas – Science of The Total Environment

Effect of Intestinal Flora on Protein Expression of Drug-Metabolizing Enzymes and Transporters in the Liver and Kidney of Germ-Free and Antibiotics-Treated Mice – Takuya Kuno – Molecular Pharmaceutics

Consequences of organ choice in describing bacterial pathogen assemblages in a rodent population – P. Villette – Epidemiology & Infection

High-Quality Whole-Genome Sequences of the Oligo-Mouse-Microbiota Bacterial Community – Debora Garzetti – Genome Announcements

  • Animal microbiome

Wild Mouse Gut Microbiota Promotes Host Fitness and Improves Disease Resistance – Stephan P. Rosshart – Cell

Impact of Low and High Doses of Marbofloxacin on the Selection of Resistant Enterobacteriaceae in the Commensal Gut Flora of Young Cattle: Discussion of Data from 2 Study Populations – Lhermie Guillaume – Foodborne Pathogens and Disease

  • Forensic Microbiome

Successive bacterial colonisation of pork and its implications for forensic investigations – Jessica Handke – Forensic Science International

Targeted sequencing of clade-specific markers from skin microbiomes for forensic human identification – Sarah E. Schmedes – Forensic Science International: Genetics

  • Plant, root, and soil microbiome

Characterization of fungal communities of developmental stages in table grape grown in the northern region of South Africa – P.C. Carmichael – Journal of Applied Microbiology

Mycorrhizae, invasions, and the temporal dynamics of mutualism disruption – Sara Grove – Journal of Ecology

Soil bacterial community mediates the effect of plant material on methanogenic decomposition of soil organic matter – Quan YuanSoil Biology and Biochemistry

Analysis of bacterial communities and characterization of antimicrobial strains from cave microbiota – Muhammad Yasir – Brazilian Journal of Microbiology

  • Waste and Pollution 

Bioaugmentation of thiabendazole-contaminated soils from a wastewater disposal site: Factors driving the efficacy of this strategy and the diversity of the indigenous soil bacterial community – Evangelia S. Papadopoulou – Environmental Pollution

  • Built environment

Human health risks for Legionella and Mycobacterium avium complex (MAC) from potable and non-potable uses of roof-harvested rainwater – Kerry A.Hamilton – Water Research

  • Techniques

Optimization of GC/TOF MS analysis conditions for assessing host-gut microbiota metabolic interactions: Chinese rhubarb alters fecal aromatic Amino acids and phenol metabolism – Shan Yin – Analytica Chimica Acta

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  • Microbes in the news

Stress may harm gut health as much as junk food – Honor Whiteman – Medical News Today

Different Microbial Communities Live Along Female Reproductive Tract – GenomeWeb

Gut Health May Begin in the Mouth – Lydialyle Gibson – Havard

October 21, 2017

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Plant and soil microbiome focus today: Rhizospheric microbial communities of the frankincense producing Boswellia sacra tree, Coffea arabica, and the damask rose, as well as plant species in the Puerto Rico tropical forest, the Mediterranean mountains, and extreme Arctic and Alpine climates. 

Events and jobs

Post-doctoral Fellowship in Microbial Genomics – Brigham & Women’s Hospital – The Massachusetts Host-Microbiome Center

Microbiology Sales Executive – Ireland

Microbiology Lab Technician – Catalent – Brussels, Belgium

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  • General microbiome

Special Meeting Sections for the ASM Conference on Mechanisms of Interbacterial Cooperation and Competition – George A. O’Toole – Journal of Bacteriology

  • Human oral microbiome

Nutrigenomics in periodontics – An overview – Singh Soundanya –
International Journal of Oral Health Dentistry

  • Human gut microbiome

Review: Health and environmental applications of gut microbiome: a review – Soumya Chatterjee – The Journal of Society of Ecological Chemistry and Engineering

The Influence of Proton Pump Inhibitors on the Fecal Microbiome of Infants with Gastroesophageal Reflux—A Prospective Longitudinal Interventional Study – Christoph Castellani – Frontiers in Cellular and Infection Microbiology

Review: Host–Microbiota Mutualism in Metabolic Diseases – Salvatore Fabbiano – Frontiers in Endocrinology

Review: Interactions between Bacteria and Bile Salts in the Gastrointestinal and Hepatobiliary Tracts – Verónica Urdaneta – Frontiers in Medicine

Review: Prebiotic–Probiotic Relationship: The Genetic Fundamentals of Polysaccharides Conversion by Bifidobacterium and Lactobacillus Genera – Penka Petrova – Food Bioconversion

Impact of Dietary Resistant Starch on the Human Gut Microbiome, Metaproteome, and Metabolome – Tanja V. Maier – mBio

Review: Can the gastrointestinal microbiota be modulated by dietary fibre to treat obesity? – H. C. Davis – Irish Journal of Medical Science

Diet, Environments, and Gut Microbiota. A Preliminary Investigation in Children Living in Rural and Urban Burkina Faso and Italy – Carlotta De Filippo – Frontiers in Microbiology

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  • Animal experiments

Study on alterations of physiological functions in aged constipation rats with fluid-deficiency based on metabonomic and microbiology analysis – Deliang Liu – Royal Society of Chemistry

  • Animal microbiome

The Low-Diversity Fecal Microbiota of the Critically Endangered Kākāpō Is Robust to Anthropogenic Dietary and Geographic Influences – Elena K. Perry – Frontiers and Microbiology

Alternative growth promoters modulate broiler gut microbiome and enhance body weight gain – Serajus Salaheen – Frontiers in Microbiology

Microbial Communities in North American Ixodid Ticks of Veterinary and Medical Importance – Andrea S. Varela-Stokes – Frontiers in Veterinary Science

Assessing the impact of rumen microbial communities on methane emissions and production traits in Holstein cows in a tropical climate – Camila S. Cunha – Systematic and Applied Microbiology

  • Plant, root, and soil microbiome

Root and rhizosphere bacterial phosphatase activity varies with tree species and soil phosphorus availability in Puerto Rico tropical forest – Kristine Grace Cabugao – Frontiers in Plant Science

Insights into Microalga and Bacteria Interactions of Selected Phycosphere Biofilms Using Metagenomic, Transcriptomic, and Proteomic Approaches – Ines Krohn-Molt – Frontiers in Microbiology

Inoculation with arbuscular mycorrhizal fungi alleviates harmful effects of drought stress on damask rose – EslamAbdel-Salam – Saudi Journal of Biological Sciences

Strong Regionality and Dominance of Anaerobic Bacterial Taxa Characterize Diazotrophic Bacterial Communities of the Arcto-Alpine Plant Species Oxyria digyna and Saxifraga oppositifolia – Manoj Kumar – Frontiers in Microbiology

Plant growth promoting rhizobacteria in amelioration of salinity stress: a systems biology perspective – Gayathri Ilangumaran – Frontiers in Plant Science

Review: Mycorrhizosphere Interactions to Improve a Sustainable Production of Legumes – José-Miguel Barea – Microbes for Legume Improvement

Taxonomic and Functional Diversity of a Quercus pyrenaica Willd. Rhizospheric Microbiome in the Mediterranean Mountains – José F. Cobo-Díaz – Forests

Review: Response and interaction of Bradyrhizobium japonicum and arbuscular mycorrhizal fungi in the soybean rhizosphere – Ram Swaroop Meena – Plant Growth Regulation

Review: Feed Your Friends: Do Plant Exudates Shape the Root Microbiome? – Joelle Sasse – Trends in Plant Science

Microbial indicators for soil quality – Michael Schloter – Biology and Fertility of Soils

Interactions of plant growth-promoting rhizobacteria and soil factors in two leguminous plants – Xiao Xiao – Applied Microbiology and Biotechnology

Soil water content during and after plant growth influence nutrient availability and microbial biomass – Ran Xue – Journal of soil science and plant nutrition

Isolation, screening and biochemical characterization of Phosphate-solubilizing rhizobacteria associated with Coffea arabica L – Befekadu Teshome – Advanced Journal of Biodiversity

Temporal variations of soil microbial community under compost addition in black soil of Northeast China – Wei Yang – Applied Soil Ecology

Differential seasonal effects of water addition and nitrogen fertilization on microbial biomass and diversity in a temperate desert – Gang Huang – Catena

Assessment of microbial diversity in the rhizosphere of Pinus roxburghii (Sarg.) and bio-inoculant potential of selected pine bacterial isolates for wheat varieties based on culture independent and culture dependent techniques – I. Naz – Plant Biology

Rhizospheric microbial communities associated with wild and cultivated frankincense producing Boswellia sacra tree – Abdul Latif Khan – PLOSone

Taxonomic structure and functional association of foxtail millet root microbiome – Tao Jin – GigaScience

  • Biotechnology

Evaluation of gastrointestinal bacterial population for the production of holocellulose enzymes for biomass deconstruction – Dhaneshwaree Asem – PLOSone

Impact of treated wastewater for irrigation on soil microbial communities – A.M. Ibekwe – Science of the Total Environment

Advancing the design and delivery of CRISPR antimicrobials – Jennie R.Fagen – Current Opinion in Biomedical Engineering

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  • Phages and viruses

Pre-Print: Insights into viral community composition of the cnidarian model metaorganism Aiptasia using RNA-Seq data – Jan D Brüwer – PeerJ

How does parvovirus B19 DNA achieve lifelong persistence in human cells? – Gloria Bua – Future Virology

  • Bioinformatics

Annotation: A Computational Solution for Streamlining Metabolomics Analysis – Xavier Domingo-Almenara – Analytical Chemistry

  • Techniques

Review: Combined imaging and molecular techniques for evaluating microbial function and composition: A review – Christopher G. Weisener – Surface and Interface Analysis

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  • Microbes in the news

Simple Bacteria Offer Clues to the Origins of Photosynthesis – Jordana Cepelewicz – Quanta Magazine

Bacteria Found in Women’s Upper Reproductive Tracts – Diana Kwon – The Scientist

New Research Shows Asymmetry in Bacteria Might Help Us Fight Antibiotic Resistance – Karla Lant – Futurism

Metal-eating bacteria could have left their “fingerprints” on Mars, proving it once hosted life – Matt Williams – Universe Today

How gut bacteria saved ‘dirty mice’ from death – Elizabeth Pennisi – Science

 

October 20, 2017

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A wide variety of studies today from the digestive microbiota of carnivorous pitcher plants, to the skin microbiome of dogs, and the impacts of probiotics on male fertility in a mouse model of obesity. 

Events and jobs

Microbiome World Congress – November 7-8, 2017, Capital Hilton, Washington, DC – registration

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  • General microbiome

The Pelagic Bacterium Paraphotobacterium marinum Has the Smallest Complete Genome Within the Family Vibrionaceae – Zhaobin Huang – Frontiers in Microbiology

Review: Uncultivated microbes in need of their own taxonomy – Konstantinos T Konstantinidis – The ISME Journal

Review: The growing tree of Archaea: new perspectives on their diversity, evolution and ecology – Panagiotis S Adam – The ISME Journal

  • Human respiratory microbiome

Antibiotic exposure and interpersonal variance mask the effect of ivacaftor on respiratory microbiota composition – Anton Y. Peleg – Journal of Cystic Fibrosis

  • Human gut microbiome

Carbapenem-resistant Enterobacteriaceae colonization (CRE) and subsequent risk of infection and 90-day mortality in critically ill patients, an observational study – Thomas Howe McConville – PLOSone

Review: Antibiotics, gut microbiome, and obesity – Karen S. W. Leong – Clinical Endocrinology

Review: Gut microbiota changes in the extreme decades of human life: a focus on centenarians – Aurelia Santoro – Cellular and Molecular Life Sciences

Review: Salmonella enterica Serovar Typhimurium Strategies for Host Adaptation – Christopher J. Anderson – Frontiers in Microbiology

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  • Animal Experiments

Lactobacillus rhamnosus PB01 (DSM 14870) supplementation affects markers of sperm kinematic parameters in a diet-induced obesity mice model – Fereshteh Dardmeh – PLOSone

  • Animal microbiome

Metagenomic binning of a marine sponge microbiome reveals unity in defense but metabolic specialization – Beate M Slaby – The ISME Journal

A polyphenol-enriched diet and Ascaris suum infection modulate mucosal immune responses and gut microbiota composition in pigs – Andrew R. Williams – PLOSone

Individual signatures and environmental factors shape skin microbiota in healthy dogs – Anna Cuscó – Microbiome

Review: Metagenomic investigation of gastrointestinal microbiome in cattle – Minseok Kim – AJAS

  • Plant, root, and soil microbiome

Linking the development and functioning of a carnivorous pitcher plant’s microbial digestive community – David W Armitage – The ISME Journal

Biogeography and organic matter removal shape long-term effects of timber harvesting on forest soil microbial communities – Roland C Wilhelm – The ISME Journal

Differences in soil fungal assemblages associated with native and non-native tree species of varying weediness – David R. Toole – Biological Invasions

Nitric Oxide Accumulation: The Evolutionary Trigger for Phytopathogenesis – Margarida M. Santana – Frontiers in Microbiology

  • Water and extremophile microbiome

Genome sequences of lower Great Lakes Microcystis sp. reveal strain-specific genes that are present and expressed in western Lake Erie blooms – Kevin Anthony Meyer – PLOSone

Mixotrophy drives niche expansion of verrucomicrobial methanotrophs – Carlo R Carere – The ISME Journal

High abundance and expression of transposases in bacteria from the Baltic Sea – Theoden Vigil-Stenman – The ISME Journal

Genome sequences of lower Great Lakes Microcystis sp. reveal strain-specific genes that are present and expressed in western Lake Erie blooms – Kevin Anthony Meyer – PLOSone

High-throughput sequencing revealed novel Dehalococcoidia in dechlorinating microbial enrichments from PCB contaminated marine sediments – B. Matturro – FEMS Microbiology Ecology

Flooding Duration Affects the Structure of Terrestrial and Aquatic Microbial Eukaryotic Communities – Oliver Röhl – Environmental Microbiology

Sediment microbial taxonomic and functional diversity in a natural salinity gradient challenge Remane’s “species minimum” concept – Christina Pavloudi – PeerJ

The Exometabolome of Two Model Strains of the Roseobacter Group: A Marketplace of Microbial Metabolites – Gerrit Wienhausen – Frontiers in Microbiology

  • Built environment

Indoor microbiota in severely moisture damaged homes and the impact of interventions – Balamuralikrishna Jayaprakash – Microbiome

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  • Probiotics / prebiotics

Review: Probiotics in the Prevention of Gestational Diabetes Mellitus – Luisa F. Gomez Arango – Nutrition and Diet in Maternal Diabetes

  • Phages and viruses

Microencapsulation of Clostridium difficile specific bacteriophages using microfluidic glass capillary devices for colon delivery using pH triggered release – Gurinder K. Vinner – PLOSone

Novel chaperonins are prevalent in the virioplankton and demonstrate links to viral biology and ecology – Rachel L Marine – The ISME Journal

  • Techniques

A simpler and more cost-effective peptide biosynthetic method using the truncated GST as carrier for epitope mapping – Wan-Xiang Xu – PLOSone

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October 19, 2017

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Today, we have a short Digest but with interesting remarks: Alzheimer’s disease associated microbiome, the bacterial tree of Life and more.

 

Human Microbiome

Gut microbiome alterations in Alzheimer’s disease – Nicholas M. Vogt – Scientific Reports

Links of gut microbiota composition with alcohol dependence syndrome and alcoholic liver disease – Veronika B. Dubinkina – Microbiome (BMC)

Male-specific Association Between Fat Free Mass Index and Faecal Microbiota in 2 to 3 Year Old Australian Children – Paula Smith-Brown – Journal of Pediatric Gastroenterology & Nutrition

 

General Microbiome

Enrichment allows identification of diverse, rare elements in metagenomic resistome-virulome sequencing – Noelle R. Noyes – Microbiome (BMC)

Sulfites inhibit the growth of four species of beneficial gut bacteria at concentrations regarded as safe for food – Sally V. Irwin – PLoS ONE

Research Highlights: Host-microbe interactions: Aiming at GPCRs – Mirella Bucci – Nature Chemical Biology

 

Animal Microbiome

Recombinant Incretin-Secreting Microbe Improves Metabolic Dysfunction in High-Fat Diet Fed Rodents – Paul M. Ryan – Scientific Reports

Microbiota Diversification and Crash Induced by Dietary Oxalate in the Mammalian Herbivore Neotoma albigula – Aaron W. Miller – mSphere

Commentary: Microbes REV up Host Metabolism around the Clock – Geoffrey N. Pronovost – Immunity

Impact of age-related mitochondrial dysfunction and exercise on intestinal microbiota composition – David Houghton – The Journals of Gerontology Series A

Comparative Analysis of Gut Microbiota of Culex restuans (Diptera: Culicidae) Females From Different Parents – Ephantus J Muturi – Journal of Medical Entomology

 

Beneficial Microbes and Molecules

Maternal milk feedings reduce sepsis, necrotizing enterocolitis and improve outcomes of premature infants – J Cortez – Journal of Perinatology

Therapeutic potential of Bifidobacterium breve strain A1 for preventing cognitive impairment in Alzheimer’s disease – Yodai Kobayash – Scientific Reports

Recombinant Incretin-Secreting Microbe Improves Metabolic Dysfunction in High-Fat Diet Fed Rodents – Paul M. Ryan – Scientific Reports

 

Environmental Microbiome

The plant circadian clock influences rhizosphere community structure and function – Charley J Hubbard – The ISME Journal

 

Evolution

Towards a balanced view of the bacterial tree of life – Frederik Schulz – Microbiome (BMC)

 

Extremophiles

Primary and heterotrophic productivity relate to multi-kingdom diversity in a hypersaline mat – Hans C. Bernstein – FEMS Microbiology Ecology

 

Non-Microbiology picks

Sci-Hub provides access to nearly all scholarly literature – Daniel S Himmelstein – PeerJ Preprints

Nature index: On the biotech block – Alexandra Ossola – Nature

 

October 16, 2017

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Events and jobs

Two open pre-doctoral research fellow positions  –  Click here and here for details- Bioinformatics Research Group – Małopolska Centre of Biotechnology in Kraków, Poland

R & D Scientist – Fluid-Screen, Inc. (FSI) – Cambridge, MA

 

Animal microbiome 

An immune-related gene expression atlas of the shrimp digestive system in response to two major pathogens brings insights into the involvement of hemocytes in gut immunity – NK Ahila – Microbial Pathogenesis

Do host-associated gut microbiota mediate the effect of an herbicide on disease risk in frogs? – SA Knutie – Journal of Animal Ecology

 

Plant, root and soil microbiome

Review: Pesticidal prospectives of chitinolytic bacteria in agricultural pest management – ARNS Subbanna – Soil Biology and Biochemistry

Impact of the Fenton-like treatment on the microbial community of a diesel-contaminated soil – F Polli – Chemosphere

Influence of resistance breeding in common bean on rhizosphere microbiome composition and function. – LW Mendes – The ISME Journal

 

 

Phages and viruses

Relevance of host cell surface glycan structure for cell specificity of influenza A virus – M Kastner – bioRxiv

 

Techniques

Single-cell transcriptional dynamics of flavivirus infection – F Zanini – bioRxiv

Slow digestible colored rice flour as wall material for microencapsulation: Its impacts on gut bacterial population and metabolic activities – I Wattananapakasem – Food Research International

 

Microbes in the news 

MBL Imaging Technology Reveals Organization of Gut Bacteria – Capecod.com

The secret germ warfare tests conducted off Devonport – The Herald

5 Good reasons to wash your hands as often as possible – South Coast Herald

Frank A. Bures: Hair growth after fecal transplants – Winona Daily News

THE BEAUTY OF BIO: DOES PROBIOTIC SKINCARE WORK? – The Times

Bacteria offer protection against breast cancer? – The Times of India

Viruses discovered a century ago may be our best defense against a threat that could kill 10 million people a year by 2050 – Business Insiders

October 15, 2017

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General microbiome

Metagenome Analyses of Multispecies Microbial Biofilms: First Steps Toward Understanding Diverse Microbial Systems on Surfaces – Christel Schmeisser, Functional Metagenomics: Tools and Applications

Prediction analysis for microbiome sequencing data – Tao Wang, arxiv

Metagenomic Cosmid Libraries Suitable for Functional Screening in Proteobacteria – Jiujun Cheng, Functional Metagenomics: Tools and Applications

Moulds associated with contaminated ocular and injectable drugs: FDA recalls, epidemiology considerations, drug shortages, and aseptic processing – Donald G. Ahearn, Medical Mycology

Human skin microbiome

High-Altitude Living Shapes the Skin Microbiome in Humans and Pigs – Bo Zeng, Frontiers in Microbiology

Human vaginal microbiome

Role of Molecular Biology in Diagnosis and Characterization of Vulvo-Vaginitis in Clinical Practice – Donders G.G.G., Gynecologic and Obstetric Investigation

Human gut microbiome

A Review of the Oesophageal Microbiome in Health and Disease – Dervla Kelly, Methods in Microbiology

Prediction of functional profiles of gut microbiota from 16S rRNA metagenomic data provides a more robust evaluation of gut dysbiosis occurring in Japanese type 2 diabetic patients – Ryo Inoue, Journal of Clinical Biochemistry and Nutrition

Human oral microbiome

The Effect of Supragingival Biofilm Re-development on the Subgingival Microbiota in Chronic Periodontitis – Fátima Aparecida Rocha Resende Hartenbach, Archives of Oral Biology

Animal experiments

Spatial organization of a model 15-member human gut microbiota established in gnotobiotic mice – Jessica L. Mark Welch, PNAS

Comparative study of probiotic effects of Lactobacillusand Bifidobacteria strains on cholesterol levels, liver morphology and the gut microbiota in obese mice – Rostyslav V. Bubnov, The EPMA Journal

Study on improving anaerobic co-digestion of cow manure and corn straw by fruit and vegetable waste: methane production and microbial community in CSTR process – Xuemei Wang, Bioresource Technology

Animal microbiome

Perinatal Bisphenol A Exposure Induces Chronic Inflammation in Rabbit Offspring via Modulation of Gut Bacteria and Their Metabolites – Lavanya Reddivari, mSystems

Hymenobacter cavernae sp. nov., isolated from a karst cave – Hai-Zhen Zhu, International Journal of Systematic and Evolutionary Microbiology

Plant, root, and soil microbiome

Ciceribacter thiooxidans sp. nov., a novel nitrate-reducing thiosulfate-oxidizing bacterium isolated from sulfide-rich anoxic sediment – Tongchu Deng, International Journal of Systematic and Evolutionary Microbiology

Deinococcus taklimakanensis sp. nov., isolated from desert soil –  Zuobing Liu, International Journal of Systematic and Evolutionary Microbiology

Improvement of the catalytic characteristics of a salt-tolerant GH10 xylanase from Streptomyce rochei L10904 – Qin Li, International Journal of Biological Macromolecules

Trees harness the power of microbes to survive climate change – Jennifer A. Lau, PNAS

Exploring the earthworm gut as model for soil microbial ecology – Fatima Hussain, MBL

Soil proteomics for exploitation of microbial diversity in Fusarium wilt infected and healthy rhizosphere soils of tomato – R. Manikandan, Physiological and Molecular Plant Pathology

The intimate talk between plants and microorganisms at the leaf surface – Wendy Aragón, Journal of Experimental Botany

Metagenomics of Plant Microbiomes – G. Brader, Functional Metagenomics: Tools and Applications

Effects of different soil remediation methods on inhibition of lead absorption and growth and quality of Dianthus superbus L. – Xiaoyu Yang, Environmental Science and Pollution Research

Interactions of Root-Feeding Insects with Fungal and Oomycete Plant Pathogens – Telsa Willsey, Frontiers in Plant Science

Soil proteomics for exploitation of microbial diversity in Fusarium wilt infected and healthy rhizosphere soils of tomato – R. Manikandan, Physiological and Molecular Plant Pathology

Switchgrass Yield, Nutrient Uptake, And Rhizosphere Microbial Community Composition As Affected By Cultivar And Soil Fertility – Anne Sawyer, University of Minnesota Digital Conservancy

Ecoenzymatic stoichiometry and microbial nutrient limitation in rhizosphere soil in the arid area of the northern Loess Plateau, China – Yongxing Cui, Soil Biology and Biochemistry

Soil microbiota respond to green manure in organic vineyards – Claudia M. O. Longa, Journal of Applied Microbiology

Water and extremophile microbiome

Anoxynatronum buryatiense sp. nov., an anaerobic alkaliphilic bacterium from a low mineralization soda lake in Buryatia, Russia – Yana Ryzhmanova, International Journal of Systematic and Evolutionary Microbiology

100 kGy gamma-affected microbial communities within the ancient Arctic permafrost under simulated Martian conditions – Vladimir S. Cheptsov, Extremophiles

Effect of environmental parameters on biodiversity of the fungal component in lithic Antarctic communities – Laura Selbmann, Extremophiles

Biomineralisation of carbonate and sulphate by the halophilic bacterium Halomonas maura at different manganese concentrations – Almudena Rivadeneyra, Extremophiles

Biosurfactant production by haloalkaliphilic Bacillusstrains isolated from Red Sea, Egypt – Khouloud M.Barakat, The Egyptian Journal of Aquatic Research

Mass Spectrometry for the Study of Microbial Communities in Environmental Waters – Inês C. Santos, Advances in Chemical Pollution, Environmental Management and Protection

Responses of microbial community to pH stress in bioleaching of low grade copper sulfide – Yuguang Wang, Bioresource Technology

Mass Spectrometry for the Study of Microbial Communities in Environmental Waters – Inês C. Santos, Advances in Chemical Pollution, Environmental Management and Protection

Waste microbes

Microbial characteristics analysis and kinetic studies on substrate composition to methane after microbial and nutritional regulation of fruit and vegetable wastes anaerobic digestion – Chunhui Zhao, Bioresource Technology

Antibiotic resistance genes and associated microbial community conditions in aging landfill systems – Dong Wu, Environmental Science and Technology

Bioinformatics

Bioinformatics in Microbiome Analysis – Yuhan Hao, Methods in Microbiology

Techniques

Enhancing Metagenomic Approaches Through Synthetic Biology – Luana de Fátima Alves, Functional Metagenomics: Tools and Applications

Enhancing Functional Metagenomics of Complex Microbial Communities Using Stable Isotopes – Marcela Hernández, Functional Metagenomics: Tools and Applications

The P/N (Positive-to-Negative Links) Ratio in Complex Networks—A Promising In Silico Biomarker for Detecting Changes Occurring in the Human Microbiome – Zhanshan (Sam) Ma, Microbial Ecology

Challenges and Opportunities in Discovery of Secondary Metabolites Using a Functional Metagenomic Approach – Alinne L. R. Santana-Pereira, Functional Metagenomics: Tools and Applications

Emerging whole-cell modeling principles and methods – Arthur P. Goldberg, arxiv

Expression Platforms for Functional Metagenomics: Emerging Technology Options Beyond Escherichia coli – Anna Lewin, Functional Metagenomics: Tools and Applications

Microbes in the news

AST: The Linchpin of Antimicrobial Stewardship – James Lewis, ModernMedicine Network

The Black Death Rages In Madagascar –  Julianna LeMieux, American Council on Science and Health

Report: 17 New Species Of Bacteria Found Every Day In World’s Rainforest Cafés – The Onion (Satire)

October 12, 2017

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Interesting papers from every category (especially in “Animal studies, animal microbiome”), and many on molecular mechanisms. Many of the alerts are from books (specifically on yeasts and soil/plant communities) listed below, so be sure to check their table of contents out!

Events and jobs
Biomedical Scientist – microbiology – Edinburgh, Scotland – Matchtech

Technician (Microbiology) – Birmingham, Alabama – LabCorp

Instructor in Microbiology – Corvallis, OR – Oregon State University

Senior Hospital Scientist Microbiology – Tamworth, New South Wales, Australia – NSW Health Pathology

Unlocking the Microbiome – November 15, London, UK – Microbiology Society

General microbiome
The P/N (Positive-to-Negative Links) Ratio in Complex Networks-A Promising In Silico Biomarker for Detecting Changes Occurring in the Human Microbiome – Zhanshan (Sam) Ma – Microbial Ecology

Dysbiosis and Its Discontents – Katarzyna B. Hooks – mBio

Book: Yeasts in Natural Ecosystems: Ecology – Andrey Yurkov, María I. Pozo
Contains multiple articles of interest.

Pregnancy and early life
Transfer and Persistence of a Multi-Drug Resistance Plasmid in situ of the Infant Gut Microbiota in the Absence of Antibiotic Treatment – Heidi Gumpert – Frontiers in Microbiology

Cesarean Section, Formula Feeding, and Infant Antibiotic Exposure: Separate and Combined Impacts on Gut Microbial Changes in Later Infancy – Farzana Yasmin – Frontiers in Pediatrics

Multi-site human microbiome
Oral Lactobacillus Counts Predict Weight Gain Susceptibility: A 6-Year Follow-Up Study – J.A. Rosing – Obesity Facts

Review: Nutritional habits, risk, and progression of Parkinson disease – Roberto Erro – Journal of Neurology

Review: From Osteoimmunology to Osteomicrobiology: How the Microbiota and the Immune System Regulate Bone – Emory Hsu – Calcified Tissue International

Human respiratory microbiome
Review: Role of microbiota on lung homeostasis and diseases – Jian Wang – Science China Life Sciences

Human gut microbiome
Molecular Mechanism by which Prominent Human Gut Bacteroidetes Utilize Mixed-Linkage Beta-Glucans, Major Health-Promoting Cereal Polysaccharides – Kazune Tamura – Cell Reports

Reciprocal Prioritization to Dietary Glycans by Gut Bacteria in a Competitive Environment Promotes Stable Coexistence – Yunus E. Tuncil – mBio

The gut microbiome in atherosclerotic cardiovascular disease – Zhuye Jie – Nature Communications

Cytotoxic and regulatory roles of mucosal-associated invariant T cells in type 1 diabetes – Ophélie Rouxel – Nature Immunology

Review: How diet can impact gut microbiota to promote or endanger health – Benoit Chassaing – Current Opinion in Gastroenterology

Review: Management of inflammatory bowel disease-related anaemia and iron deficiency with specific reference to the role of intravenous iron in current practice – Jürgen Stein – Expert Opinion on Pharmacotherapy

Review: Bile acid-microbiota crosstalk in gastrointestinal inflammation and carcinogenesis – Wei Jia – Nature Reviews Gastroenterology and Hepatology

Review: Environmental triggers in IBD: a review of progress and evidence – Ashwin N. Ananthakrishnan – Nature Reviews Gastroenterology and Hepatology

Animal experiments
Spatial organization of a model 15-member human gut microbiota established in gnotobiotic mice – Jessica L. Mark Welch – PNAS

Potential role of intratumor bacteria in mediating tumor resistance to the chemotherapeutic drug gemcitabine – Leore T. Geller – Science

Increased weight gain by C-section: Functional significance of the primordial microbiome – Keith A. Martinez II – Science Advances

Epicutaneous Tolerance Induction to a Bystander Antigen Abrogates Colitis and Ileitis in Mice – David Dunkin – Inflammatory Bowel Diseases

Dietary fatty acids control the species of N-acyl-phosphatidylethanolamines synthesized by therapeutically modified bacteria in the intestinal tract – Noura S Dosoky – ACS Infectious Diseases

In Vitro Response of Rumen Microbiota to the Antimethanogenic Red Macroalga Asparagopsis taxiformis – Lorenna Machado – Microbial Ecology

Host effects on microbiota community assembly – Kathrin Näpflin – Journal of Animal Ecology
In bumblebees!

Animal microbiome
Comprehensive skin microbiome analysis reveals the uniqueness of human-associated microbial communities among the class Mammalia – Ashley Anne Ross – bioRxiv

Extensive Core Microbiome in Drone-Captured Whale Blow Supports a Framework for Health Monitoring – Amy Apprill – mSystems
Drones were involved.

The Microbiome of Seriola lalandi of Wild and Aquaculture Origin Reveals Differences in Composition and Potential Function – Carolina Ramirez – Frontiers in Microbiology

A Novel Lactobacilli-Based Teat Disinfectant for Improving Bacterial Communities in the Milks of Cow Teats with Subclinical Mastitis – Jie Yu – Frontiers in Microbiology

Amplicon sequencing of bacterial microbiota in abortion material from cattle – Sara Vidal – Veterinary Research

Plant, root, and soil microbiome
Book: Soil Biological Communities and Ecosystem Resilience – Editors Martin Lukac, Paola Grenni, Mauro Gamboni
Multiple articles of interest.

Linking nitrogen load to the structure and function of wetland soil and rhizosphere microbial communities – Eric R. Hester – bioRxiv

Template Preparation Affects 16S rRNA High-Throughput Sequencing Analysis of Phyllosphere Microbial Communities – Xiaoyan Tian – Frontiers in Plant Science

Biocontrol of Bacterial Leaf Blight of Rice and Profiling of Secondary Metabolites Produced by Rhizospheric Pseudomonas aeruginosa BRp3 – Sumera Yasmin – Frontiers in Microbiology

Integration of multi-omics techniques and physiological phenotyping within a holistic phenomics approach to study senescence in model and crop plants – Dominik K Großkinsky – Experimental Botany

Gaining Insight into Plant Responses to Beneficial and Pathogenic Microorganisms Using Metabolomic and Transcriptomic Approaches – Fernando Matías Romero – Metabolic Engineering for Bioactive Compounds

Water and extremophile microbiome
Globally Important Haptophyte Algae Use Exogenous Pyrimidine Compounds More Efficiently than Thiamin – Magdalena A. Gutowskaa – mBio

Fungal community dynamics during a marine dinoflagellate (Noctiluca scintillans) bloom – Jing-YunSun – Marine Environmental Research

Built environment
Biodegradation of tetracycline antibiotics in A/O moving-bed biofilm reactor systems – Han-Yu Chen – Bioprocess and Biosystems Engineering

Food microbiology
Interindividual Variability in Metabolism of [6]-Shogaol by Gut Microbiota – Pei Wang – Journal of Agricultural and Food Chemistry

Microbial technology
Programmed Assembly of Pressure Sensors Using Pattern-Forming Bacteria – Yangxiaolu Cao – Nature Biotechnology
Press: Three words: Synthetic gene circuit. Self-assembling bacteria build pressure sensor – Andrew Silver – The Register

Probiotics / prebiotics / antibiotics
Non-digestible oligosaccharides directly regulate host kinome to modulate host inflammatory responses without alterations in the gut microbiota – Richard Y. Wu – Microbiome

Review: Antibiotics and specialized metabolites from the human microbiota – Walaa K. Mousa – Natural Product Reports

Phages and viruses
Moderate-Throughput Identification and Comparison of Campylobacter-Infecting Bacteriophages – Tylor J. Johnson – bioRxiv

Review: Innate Viral Receptor Signaling Determines Type 1 Diabetes Onset – Zachary J. Morse – Frontiers in Endocrinology

Bioinformatics
A Massively Parallel Sequence Similarity Search for Metagenomic Sequencing Data – Masanori Kakuta – International Journal of Molecular Sciences

Microbes in the news
Hibernating ribosomes help bacteria survive – Saint Louis University – Science Daily
Paper: The cryo-EM structure of hibernating 100S ribosome dimer from pathogenic Staphylococcus aureus – Donna Matzov – Nature Communications

A century-old vaccine vial sheds light on one of medicine’s enduring mysteries – Helen Branswell – STAT News

Predatory bacteria-the quest for a new class of antibiotics – Phys.org

Mind the Gut: Copenhagen Exhibition Explores Bacteria and Feelings – Clara Rodríguez Fernández – Labiotech.eu

Gut Love: Bacteria, Love and Immunology Intersect at Esther Klein Gallery Exhibit – PRWeb

How mouldy mushrooms and frog spawn have been turned into art on Spring Bank – Amgus Young – Hull Daily Mail

Microbes on the market
Kaleido Biosciences and CoreBiome Partner to Accelerate Microbiome Therapeutic Development – Business Wire

Tiffany’s non-microbiology picks
The rise and fall and rise again of 23andMe – Erika Check Hayden – Nature

The future of DNA sequencing – Eric D. Green – Nature

October 11, 2017

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Events and jobs

Microbiology Laboratory Analyst – Cork (Ringaskiddy Road, Monkstown, Co. Cork)

 

Pregnancy and early life

Effect of probiotics on perinatal outcome in patients at high risk of preterm birth. – N Kirihara – The Journal of Obstetrics and Gynaecology Research

 

 

Human oral microbiome

Quantification of carious pathogens in the interdental microbiota of young caries-free adults. – D Bourgeois – PLoS One

 

Human gut microbiome

The gut microbiome in atherosclerotic cardiovascular disease – Z Jie – Nature Communications

Review: The microbiome as a novel paradigm in studying stress and mental health. – RT Liu – The American Psychologist

Review: The mycobiome: Role in health and disease, and as a potential probiotic target in gastrointestinal disease – CL Hager – Digestive and Liver Disease

Review: Selected aspects of the human gut microbiota – M Ventura – Cellular and Molecular Life Sciences

 

Animal experiments 

Modulation of the gut microbiota by the mixture of fish oil and krill oil in high-fat diet-induced obesity mice. – C Ciu – PLoS One

Comparative characterization of bacterial communities in geese fed all-grass or high-grain diets – X Qu – PLoS One

 

Animal microbiome 

Pycnoscelus surinamensis cockroach gut microbiota respond consistently to a fungal diet without mirroring those of fungus-farming termites – C Richards – PLoS One

 

Plant, root, and soil microbiome

The impact of the omics era on the knowledge and use of Lysobacter spp. to control phytopathogenic microorganisms. – G Puopolo – Journal of Applied Microbiology

The effect of pH, electrolytes and temperature on the rhizosphere geochemistry of phytosiderophores. – M Walter – Plant and Soil

Pathogenic potential of environmental resident fungi from ornithogenic soils of Antarctica – JRP Sousa – Fungal Biology

Influences of Different Halophyte Vegetation on Soil Microbial Community at Temperate Salt Marsh – DR Chaudhary – Microbial Ecology

 

Built environment 

Unravelling the core microbiome of biofilms in cooling tower systems. – L Di Gregorio – Biofouling

 

 

Phages and viruses

Ecogenomics of virophages and their giant virus hosts assessed through time series metagenomics – S Roux – Nature Communications

Nasty Prophages and the Dynamics of Antibiotic-Tolerant Persister Cells – A Harms – bioRxiv

 

Techniques

Modified RNA-seq method for microbial community and diversity analysis using rRNA in different types of environmental samples. – YW Yan – PLoS One

A GLM-based latent variable ordination method for microbiome samples. – MB Sohn – Biometrics

Rapid enteric testing to permit targeted antimicrobial therapy, with and without Lactobacillus reuteri probiotics, for paediatric acute diarrhoeal disease in Botswana: A pilot, randomized, factorial, controlled trial – JM Pernica – PLoS One

A Tomato Spotted Wilt Virus S RNA-based Replicon System in Yeast –  K Ishibashi – Scientific Reports

Analyses Approaches for Bacteria – E Ribeiro – Exposure to Microbiological Agents in Indoor and Occupational Environments

 

Microbes in the news

Bacteria self-organize to build working sensors – EurekAlert

Effects of nutritional factors on the intestinal microbiota – Freie Universität

October 8, 2017

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General microbiome

Repurposed kinase inhibitors and β-lactams as a novel therapy for antibiotic resistant bacteria – Nathan Wlodarchak, bioRxiv

Isolation and whole genome analysis of endospore-forming bacteria from heroin – Jörn Kalinowski, Forensic Science International: Genetics

Events and jobs

DOCTORAL STUDENT / POSTDOCTORAL RESEARCHER, EARLY INTERACTIONS OF INTESTINAL MICROBIOTA AND THE IMMUNE SYSTEM – University of Helsinki

Director of the Microbiome Research Laboratory – Microbiome Research Laboratory (MRL) at UT Southwestern

Microbiology Faculty Position – University of Chicago

Human gut microbiome

Microbiome, inflammation and colorectal cancer – Ju Chen, Seminars in Immunology

The fecal microbiome of ALS patients – David Brenner, Neurobiology of Aging

Targeting gut microbiota: Lactobacillus alleviated type 2 diabetes via inhibiting LPS secretion and activating GPR43 pathway – Kai-Kai Li, Journal of Functional Foods

Volatile Organic Compounds in Feces Associate With Response to Dietary Intervention in Patients With Irritable Bowel Syndrome – Megan Rossi, Clinical Gastroenterology and Hepatology

Proteomics Dataset: The Colon Mucosa from Inflammatory Bowel Disease Patients, Gastrointestinal Asymptomic Rheumatoid Arthritis Patients, and Controls – Tue Bjerg Bennike, Data in Brief

The mycobiome: Role in health and disease, and as a potential probiotic target in gastrointestinal disease – Christopher L. Hager, Digestive and Liver Disease

Overview of paediatric IBD – David C. Wilson, Seminars in Pediatric Surgery

Improvement of Insulin Sensitivity after Lean Donor Feces in Metabolic Syndrome Is Driven by Baseline Intestinal Microbiota Composition – Ruud S. Kootte, Cell Metabolism

Fasting the Microbiota to Improve Metabolism? – Joel T. Haas, Cell Metabolism

Fecal Transplant in Inflammatory Bowel Disease – Alexander S. Browne, Gastroenterology Clinics of North America

The Brain-Gut Axis and Stress in Inflammatory Bowel Disease  – Charles N. Bernstein, Gastroenterology Clinics of North America

Human oral microbiome

The oral microbiota in colorectal cancer is distinctive and predictive – Burkhardt Flemer, Gut microbiota

Animal experiments

Interhost dispersal alters microbiome assembly and can overwhelm host innate immunity in an experimental zebrafish model – Adam R. Burns, PNAS

Ganoderma lucidum polysaccharides improve insulin sensitivity by regulating inflammatory cytokines and gut microbiota composition in mice – S. Xua, Journal of Functional Foods

Effect of enzymatically hydrolyzed scallop visceral protein powder used as a replacement of fish meal on the growth performance, immune responses, intestinal microbiota and intestinal morphology of broiler chickens – R.E. Xing, Livestock Science

Intestinal microbiota impact sepsis associated encephalopathy via the vagus nerve – Suyan Li, Neuroscience Letters

Animal microbiome

Environmental proteomics reveals taxonomic and functional changes in an enriched aquatic ecosystem – Amanda C. Northrop, Ecosphere

Plant, root, and soil microbiome

Characterization of the first rice paddy cluster I isolate, Methyloterricola oryzae gen. nov., sp. nov. and amended description of Methylomagnum ishizawai –  Katharina Frindte, International Journal of Systematic and Evolutionary Microbiology

Water and extremophile microbiome

Ultrastructural observations on prokaryotic associates of benthic foraminifera: Food, mutualistic symbionts, or parasites? – Joan M. Bernhard, Marine Micropaleontology

Food microbiology

Potentially active spoilage bacteria community during the storage of vacuum packaged beefsteaks treated with aqueous ozone and electrolyzed water – Cristian Botta, International Journal of Food Microbiology

Next generation of microbiological risk assessment: Potential of omics data for exposure assessment – Heidy M.W. den Besten, International Journal of Food Microbiology

Characterization of lactic acid bacteria recovered from atole agrio, a traditional Mexican fermented beverage – Kati Väkeväinen, LWT – Food Science and Technology

Probiotics / prebiotics

Prebiotics and Inflammatory Bowel Disease – Heather E. Rasmussen, Gastroenterology Clinics of North America

Probiotics in Inflammatory Bowel Disease – Bincy P. Abraham, Gastroenterology Clinics of North America

Enhancing the viability of Lactobacillus rhamnosus GG after spray drying and during storage – Géraldine Broeckx, International Journal of Pharmaceutics

Microbes in the news

Second grade handwashing experiment leads to big decrease in bacteria, illness – INFECTIOUS DISEASES SOCIETY OF AMERICA, EurekAlert!

UTHealth awarded $3.1 million NIH grant to study how gut bacteria relates to diabetes – UNIVERSITY OF TEXAS HEALTH SCIENCE CENTER AT HOUSTON, EurekAlert!

Scientists are trying to figure out how to keep bacteria from running rampant on space missions –  Claire Maldarelli, Popular Science

“Good” Gut Bacteria Linked to Melanoma Immunotherapy Response – GEN