Fungi / Mycobiome

Page created December 2017, updated February 2018.

General Fungi taxonomy / phylogeny

A phylogenetic framework for the kingdom Fungi based on 18S rRNA gene sequences
– Pablo Yarza – Marine Genomics – December 2017

Novel ITS1 Fungal Primers for Characterization of the Mycobiome – Mykhaylo Usyk – mSphere – December 2017

Next-Generation Sequencing in the Mycology Lab – Jan Zoll – Current Fungal Infection Reports – June 2016

Human mycobiome

Fungal Diversity of Human Gut Microbiota Among Eutrophic, Overweight, and Obese Individuals Based on Aerobic Culture-Dependent Approach – Francis M. Borges – Current Microbiology – January 2018

Fungi stabilize connectivity in the lung and skin microbial ecosystems – Laura Tipton – Microbiome – January 2018

Review: Forgotten fungi—the gut mycobiome in human health and disease – Chloe E. Huseyin – FEMS Microbiology Reviews – April 2017

Editorial: The emerging importance and challenges of the human mycobiome – Heidi H. Kong – Virulence – January 2017

Obesity changes the human gut mycobiome – M. Mar Rodríguez – Scientific Reports – October 2015

The lung mycobiome: an emerging field of the human respiratory microbiome – Linh D. N. Nguyen – Frontiers in Microbiology – February 2015

Analysis of the nasal vestibule mycobiome in patients with allergic rhinitis
Won Hee Jung – Mycoses – February 2015

Review: Digestive tract mycobiota: A source of infection – Médecine et Maladies Infectieuses – N. Gouba – January 2015

ReviewThe Human Mycobiome – Patrick C. Seed – Cold Spring Harbor Perspectives in Medicine – November 2014

Topographic diversity of fungal and bacterial communities in human skin – Keisha Findley – Nature – May 2013

Animal mycobiome

(Abstract) Diversity of the Cloacal Mycobiome of the Juvenile Green Sea Turtle (Chelonia mydas) – Megan Gerber – October 2017

Indoor fungi

Variability of indoor fungal microbiome of green and non-green low-income homes in Cincinnati, Ohio – Kanistha Coombs – Science of the Total Environment – January 2018

Mycobiome of the Bat White Nose Syndrome Affected Caves and Mines Reveals Diversity of Fungi and Local Adaptation by the Fungal Pathogen Pseudogymnoascus (Geomyces) destructans – Tao Zhang – PLOS ONE – September 2014

Plant/root and soil mycobiome

Mycobiomes of tomato plants with vine decline – David Johnston-Monje – Canadian Journal of Plant Pathology – June 2017

Advances in Eco-Efficient Agriculture: The Plant-Soil Mycobiome – Marcela Claudia Pagano – Agriculture – February 2017

Review: Dimensions of biodiversity in the Earth mycobiome – Kabir G. Peay – Nature Reviews Microbiology – June 2016

Perspective: Disentangling global soil fungal diversity – David A. Wardle – Science – November 2014

Global diversity and geography of soil fungi – Leho Tedersoo – Science – November 2014

Endemism and functional convergence across the North American soil mycobiome – Jennifer M. Talbot – PNAS – April 2014