August 28, 2019

Today’s digest features interesting review articles about different aspects of human gut microbiome,  metaproteomics approach in microbiota, new study to tackle antibiotic resistance and updates on microbiome business.

General Microbiome

The long-term consequences of antibiotic therapy: Role of colonic short-chain fatty acids (SCFA) system and intestinal barrier integrity – Yuliia Holota – Plos One

Factors affecting the composition of the gut microbiota, and its modulation – Nihal Hasan – Peer Journal

The Microbiota and Malnutrition: Impact of Nutritional Status During Early Life – Carlos Gómez-Gallego – Annual review of Nutrition

The necessity to revise Koch’s postulates and its application to infectious and non-infectious diseases: a mini-review – Hasan Hosainzadegan – European Journal of Clinical Microbiology & Infectious Diseases

Pancreas–Microbiota Cross Talk in Health and Disease – Timon E. Adolph – Annual Review of Nutrition

Does Soil Contribute to the Human Gut Microbiome? – Winfried E.H. Blum – Microorganisms

Impact of the Microbiome on the Human Genome – Thiviya Jeyakumar – Trends in Parasitology

Problems with the concept of gut microbiota dysbiosis – Harald Brüssow – Microbial Biotechnology

Human microbiome

Lactulose Improves Cognition, Quality of Life and Gut Microbiota in Minimal Hepatic Encephalopathy: A Multi‐Center, Randomized Controlled Trial – Ji Yao Wang – Journal of Digestive Diseases

Microbial Profiles of Cirrhosis in the Human Small Intestine – Tien S. Dong – Current Gastroenterology Reports

Crosstalk between vaginal microbiome and female health: A review – Shagun Gupta – Microbial Pathogenesis

Animal experiments

Metformin and Dipeptidase Peptidyl-4 Inhibitor Differentially Modulate the Intestinal Microbiota and Plasma Metabolome of Metabolically Dysfunctional Mice – Ryan PM – Canadian Journal of Diabetes

The gut microbiome derived from anorexia nervosa patients impairs weight gain and behavioral performance in female mice – Tomokazu Hata – Endocrinology

Microbiota-derived lantibiotic restores resistance against vancomycin-resistant Enterococcus – Sohn G. Kim – Nature

Probiotics and prebiotics 

Developments in understanding and applying prebiotics in research and practice – an ISAPP conference paper – Karen P Scott – Journal of Applied Microbiology

Techniques

An automated ‘cells-to-peptides’ sample preparation workflow for high-throughput, quantitative proteomic assays of microbes – Yan Chen – Journal of Proteome Research

Comparison of metaproteomics workflows for deciphering the functions of gut microbiota in an animal model of obesity – Maria Guirro – Journal of Proteomics

An expectation-maximization algorithm enables accurate ecological modeling using longitudinal microbiome sequencing data – Chenhao Li – Microbiome

Microbes in the news

‘A holistic approach’: EU-backed project taps microbiome to optimise food production – Food navigator.com

Remodeling unhealthful gut microbiomes to fight disease – Science daily

The microbiome and the effect of antimicrobials in food production – New Food

Researchers propose new technique to remodel the gut microbiome – News Atlas

Microbes and the market

Global Human Microbiome Market 2019 Research Analysis of Players:- Merck, DuPont, MicroBiome Therapeutics, Osel – Global Market News 24

Microbiome Sequencing Market Forecast by Biolog Inc., CosmosID Inc., Illumina Inc., Metabiomics and Oxford Nanopore Technologies Ltd to 2024 – SocioHerald

 

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