Have a nice weekend! Today, several reviews about different aspects of human genome (from Vitamin D to the Impact of Colonialism in the changes of health in Indigenous people). Today, we have also several studies about poultry microbiome and changes in food microbiota, in addition with interesting studies about microbiota drug metabolism.

 

General and Human Microbiome

Review: The hygiene hypothesis at a glance: early exposures, immune mechanism and novel therapies – Gabriel M.Alexandre-Silva – Acta Tropica

Review: Dietary vitamin D, vitamin D receptor, and microbiome – Jun Sun – Current Opinion in Clinical Nutrition and Metabolic Care

Theory and Synthesis: Consequences of colonialism: A microbial perspective to contemporary Indigenous health – Emily Skelly – American Journal of Physical Anthropology

Review: Early-Life Exposures and Risk of Diabetes Mellitus and Obesity – Véronique Gingras – Current Diabetes Reports

Review: Aspects of Gut Microbiota and Immune System Interactions in Infectious Diseases, Immunopathology, and Cancer – Veronica Lazar – Frontiers in Immunology

Review: Early Disruption of the Microbiome Leading to Decreased Antioxidant Capacity and Epigenetic Changes: Implications for the Rise in Autism – Rebecca S. Eshraghi – Frontiers in Cellular Neuroscience

Review: Energy balance and gastrointestinal cancer: risk, interventions, outcomes and mechanisms – Cornelia M. Ulrich – Nature Reviews Gastroenterology & Hepatology

Review: Microbial Production of Conjugated Linoleic Acid and Conjugated Linolenic Acid Relies on a Multienzymatic System – Ana S. Salsinha – Microbiology and Molecular Biology Reviews

News & Views: Gut microbiome, microbial metabolites and the development of NAFLD – Cyrielle Caussy – Nature Reviews Gastroenterology & Hepatology

Does Severity of Alzheimer’s Disease Contribute to Its Responsiveness to Modifying Gut Microbiota? A Double Blind Clinical Trial – Azadeh Agahi – Frontiers in Neurology

Evaluation of relationship between dental caries, diabetes mellitus and oral microbiota in diabetics – Bhagyashri Ramachandra Latti – Journal of Oral and Maxillofacial Pathology

Effects of Japanese diet in combination with exercise on visceral fat accumulation – Masaki Asano – Nutrition

Enteric Virome and Bacterial Microbiota in Children with Ulcerative Colitis and Crohn’s Disease – Melissa A. Fernandes – Journal of Pediatric Gastroenterology and Nutrition

Temporal instability of the post-surgical maxillary sinus microbiota – Ioannis Koutsourelakis – BMC Infectious Diseases

Influence of cigarette smoking on the human duodenal mucosa-associated microbiota – Erin R. Shanahan – Microbiome

 

Animal Microbiome

Review: A Review of Prebiotics Against Salmonella in Poultry: Current and Future Potential for Microbiome Research Applications – Andrew C. Micciche – Frontiers in Veterinary Science

Gut Microbiota and Relevant Metabolites Analysis in Alcohol Dependent Mice – Guanhao Wang – Frontiers in Microbiology

Gut microbiota mediates the anti-obesity effect of calorie restriction in mice – Shuo Wang – Scientific Reports

Effect of humic substances on rumen fermentation, nutrient digestibility, methane emissions, and rumen microbiota in beef heifers – Stephanie A Terry – Journal of Animal Science

Effects of glucose oxidase on growth performance, gut function, and cecal microbiota of broiler chickens – Shengru Wu – Poultry Science

16S ribosomal RNA sequencing reveals a modulation of intestinal microbiome and immune response by dietary L-theanine supplementation in broiler chickens – Muhammad Saeed – Poultry Science

Microbial effects of livestock manure fertilization on freshwater aquaculture ponds rearing tilapia (Oreochromis shiranus) and North African catfish (Clarias gariepinus) – Jeremiah J. Minich – Microbiology Open

Effect of oat hulls as a free choice feeding on broiler performance, short chain fatty acids and microflora under a mild necrotic enteritis challenge – Sarbast K.Kheravii – Animal Nutrition

Application of Illumina-MiSeq high throughput sequencing and culture-dependent techniques for the identification of microbiota of silver carp (Hypophthalmichthys molitrix) treated by tea polyphenols – Shiliang Jia – Food Microbiology

 

Beneficial Microbes and Compounds

Rhubarb Peony Decoction Ameliorates Ulcerative Colitis in Mice by Regulating Gut Microbiota to Restoring Th17/Treg Balance – Shuang Luo – Journal of Ethnopharmacology

Bifidobacterium bifidum PRL2010 alleviates intestinal ischemia/reperfusion injury – Sabrina Duranti – PLoS One

Beneficial Effect of Virgin Coconut Oil on Alloxan-Induced Diabetes and Microbiota Composition in Rats – Sinisa Djurasevic – Plant Foods for Human Nutrition

 

Food Microbiome

Microbiota dynamics and volatilome profile during stink bean fermentation (Sataw-Dong) with Lactobacillus plantarum KJ03 as a starter culture – Krittanon Jampaphaeng – Food Microbiology

Microbial spoilage investigation of thawed common cuttlefish (Sepia officinalis) stored at 2 °C using next generation sequencing and volatilome analysis – F. F. Parlapani – Food Microbiology

Exploring core functional microbiota responsible for the production of volatile flavour during the traditional brewing of Wuyi Hong Qu glutinous rice wine – Zi-Rui Huang – Food Microbiology

Revealing the influence of microbiota on the quality of Pu-erh tea during fermentation process by shotgun metagenomic and metabolomic analysis – Zhongyuan Li – Food Microbiology

Influence of lactate and acetate removal on the microbiota of French fresh pork sausages – Agnès Bouju-Albert – Food Microbiology

 

Plant Microbiome

The future has roots in the past: the ideas and scientists that shaped mycorrhizal research – Paola Bonfante – New Phytology Trust

 

Experiments

Chemoselective Probe Harboring a Unique Bioorthogonal Cleavage Site for Investigation of Gut Microbiota Metabolism – Neeraj Garg – Angewandte Chemie  

An ex vivo fermentation screening platform to study drug metabolism by human gut microbiota – Evita van de Steeg – Drug Metabolism and Disposition