Identification of nitrite-oxidizing bacteria important for dark ocean carbon fixation, effects of antibiotic exposure to the maternal gut microbiota extend to offspring in mice and enhance colitis, a review on genome mining for natural products discovery.
Events and jobs
Postdoc position on biofilm-mediated co-evolution of industrial strains – Biologisk Institut, University of Copenhagen, Denmark
Human skin microbiome
Measuring the microbiome of chronic wounds with use of a topical antimicrobial dressing – A feasibility study – Lindsay Kalan – PLOS ONE
Human gut microbiome
Pre-print: Endospores and other lysis-resistant bacteria comprise a widely shared core community within the human microbiota – Sean M Kearney – bioRxiv
Opinion: Human Gut Microbiome: Function Matters – Anna Heintz-Buschart – Trends in Microbiology
Review: The gut microbiome, symptoms, and targeted interventions in children with cancer: a systematic review – Jinbing Bai – Supportive Care in Cancer
Animal experiments
Intergenerational transfer of antibiotic-perturbed microbiota enhances colitis in susceptible mice – Anjelique F Schulfer – Nature Microbiology
- Press: Here’s a New Reason You Should Worry About Antibiotics – Alexandra Sifferlin – Time
Canagliflozin reduces plasma uremic toxins and alters the intestinal microbiota composition in a chronic kidney disease mouse model – Eikan Mishima – American Journal of Physiology, Renal Physiology
Insect-based diet, a promising nutritional source, modulates gut microbiota composition and SCFAs production in laying hens – Luca Borrelli – Scientific Reports
Animal microbiome
Comparison of the gut microbiota composition between wild and captive sika deer (Cervus nippon hortulorum) from feces by high-throughput sequencing – Yu Guan – AMB Express
Plant, root, and soil microbiome
Pre-print: The effects of host species and sexual dimorphism differ among root, leaf and flower microbiomes of wild strawberries in situ – Na Wei – bioRxiv
Water and extremophile microbiome
Major role of nitrite-oxidizing bacteria in dark ocean carbon fixation – Maria G Pachiadaki – Science
- Press: Dark ocean bacteria discovered to play large role in carbon capture – Phys.Org
Investigating the bacterial community and amoebae population in rural domestic wastewater reclamation for irrigation – Bingjian Cui – Journal of Environmental Sciences
Phages and viruses
Review: Viruses of archaea: Structural, functional, environmental and evolutionary genomics – Mart Krupovic – Virus Research
Bioinformatics
Review: Omics-based natural product discovery and the lexicon of genome mining – Henrique Machado – Current Opinion in Microbiology
More microbes
Chromosome level assembly and secondary metabolite potential of the parasitic fungus Cordyceps militaris – Glenna J Kramer – BMC Genomics
Genomic assessment in Lactobacillus plantarum links the butyrogenic pathway with glutamine metabolism – Cristian Botta – Scientific Reports
Microbes in the news
Researchers conduct novel wheat microbiome analysis under four management strategies – Phys.Org
Fertility clinics treat abnormal vaginal bacteria aiming to improve reproductive outcome – Medical Xpress
Microbe threat to Mars – Andrew Masterson – Cosmos
Flies’ Feet Can Spread Bacteria – Kerry Grens – The Scientist
Despite Their Tiny Genome, A Beetle’s Bacteria Pack A Big Punch – Julianna LeMieux – American Council on Science and Health
CRISPR Harnessed to Turn Bacteria into Microscopic Tape Recorders – Genetic Engineering & Biotechnology News
- Source article: Multiplex recording of cellular events over time on CRISPR biological tape – Ravi U Sheth – Science
Bacteria hysteria
Warning: Those lipstick samples could be loaded with poop, investigation finds – Mandy Matney – Sacramento Bee
Science, career, and publishing
Pre-print: A design framework and exemplar metrics for FAIRness – Mark D Wilkinson – bioRxiv
