Colonizing FMT patients with donor bacteriophages, the microbial communities of tigers, fruit bats, hemlocks, and rainbow trout, a review on the advances in urinary microbiome research.
Multi-site human microbiome
Review: The role of the microbiota in infectious diseases – Josie Libertucci – Nature Microbiology
Human skin microbiome
Ultraviolet radiation, both UVA and UVB, influences the composition of the skin microbiome – Erin M Burns – Experimental Dermatology
Human urinary microbiome
Review: Urobiome updates: advances in urinary microbiome research – Alan J Wolfe – nature Reviews Urology
Human gut microbiome
Pre-print: Gut microbiome response to a modern Paleolithic diet in a Western lifestyle context – Monica Barone – bioRxiv
Difference in Pathomechanism Between Crohn’s Disease and Ulcerative Colitis Revealed by Colon Transcriptome – Lili Yang – Inflammatory Bowel Diseases
GABA-modulating bacteria of the human gut microbiota – Philip Strandwitz – Nature Microbiology
Impact of Individual Traits, Saturated Fat, and Protein Source on the Gut Microbiome – Jennifer M Lang – mBio
Animal experiments
Microbiome interactions shape host fitness – Alison L Gould – PNAS
Gut microbiota dysbiosis worsens the severity of acute pancreatitis in patients and mice – Yin Zhu – Journal of Gastroenterology
Microbiota-Derived Lactate Accelerates Intestinal Stem-Cell-Mediated Epithelial Development – Yong-Soo Lee – Cell Host & Microbe
A Microbiota-Derived Bacteriocin Targets the Host to Confer Diarrhea Resistance in Early-Weaned Piglets – Jun Hu – Cell Host & Microbe
Animal microbiome
Exploring variation in phyllosphere microbial communities across four hemlock species – Timothy J Rogers – Ecosphere
Analysis of the gut and gill microbiome of resistant and susceptible lines of rainbow trout (Oncorhynchus mykiss) – Ryan M Brown – Fish & Shellfish Immunology
Metagenomic analysis of captive Amur tiger faecal microbiome – Fengping He – BMC Veterinary Research
Coordinated change at the colony level in fruit bat fur microbiomes through time – Oren Kolodny – Nature Ecology & Evolution
Plant, root, and soil microbiome
Remediation of deterioration in microbial structure in continuous Pinellia ternata cropping soil by crop rotation – Zhigui He – Candadian Journal of Microbiology
Plant compartment and genetic variation drive microbiome composition in switchgrass roots – Esther Singer – Environmental Microbiology Reports
Desert plant bacteria reveal host influence and beneficial plant growth properties – Abdul Aziz Eida – PLOS ONE
Water and extremophile microbiome
Marine probiotics: increasing coral resistance to bleaching through microbiome manipulation – Phillipe M Rosado – The ISME Journal
Microbes in space
International Space Station conditions alter genomics, proteomics, and metabolomics in Aspergillus nidulans – Jillian Romsdahl – Applied Microbiology and Biotechnology
Phages and viruses
Long-term colonisation with donor bacteriophages following successful faecal microbial transplantation – L A Draper – Microbiome
Metatranscriptomic Analysis and In Silico Approach Identified Mycoviruses in the Arbuscular Mycorrhizal Fungus Rhizophagus spp. – Achal Neupane – Viruses
The intestinal virome of malabsorption syndrome-affected and unaffected broilers through shotgun metagenomics – Diane A Lima – Virus Research
Techniques
Detection of Bacteriophages: Sequence-Based Systems – Siân V Owen – Bacteriophages
More microbes
Pseudomonas aeruginosa quorum-sensing metabolite induces host immune cell death through cell surface lipid domain dissolution – Dingka Song – Nature Microbiology