Contraceptives and the vaginal microbiome, Ralstonia and CF outcome, Alzheimer’s, helminths in cats, the Mississippi River.
General microbiome and ecology
Review: Disentangling Interactions in the Microbiome: A Network Perspective – Mehdi Layeghifard – Trends in Microbiology
Book Chapter: Chapter 4 – The Human Microbiome – Jacquelyn S. Meisel – Genomic and Precision Medicine (Third Edition): Foundations, Translation, and Implementation – Chp
Pregnancy and early life
Maternal health and the placental microbiome – Elise Pelzer – Placenta
Human vaginal microbiome
* Effects of Combined Oral Contraceptives, Depot Medroxyprogesterone Acetate, and the Levonorgestrel-releasing Intrauterine System on the Vaginal Microbiome – J. Paul Brooks – Contraception
Review: Lactobacillus iners: Friend or Foe? – Mariya I. Petrova – Trends in Microbiology
Human skin microbiome
The protective effect of microbiota on S. aureus skin colonization depends on the integrity of the epithelial barrier – Marc Burian – Journal of Investigative Dermatology
Human respiratory microbiome
* Ralstonia mannitolilytica in cystic fibrosis: A new predictor of worse outcomes – I. Coman – Respiratory Medicine Case Reports
Staphylococcal species heterogeneity in the nasal microbiome following antibiotic prophylaxis revealed by tuf gene deep sequencing – Claire L. McMurray – Microbiome
Human oral microbiome (also: gut / viruses)
Transmission of viruses via our microbiomes – Melissa Ly – Microbiome
Review: Endodontic Microbiology and Pathobiology : Current State of Knowledge – Ashraf F. Fouad – Dental Clinics of North America
Human gut microbiome
Extending colonic mucosal microbiome analysis—assessment of colonic lavage as a proxy for endoscopic colonic biopsies – Euan Watt – Microbiome
Review: Crohn’s disease – Joana Torres – The Lancet
Review: The Microbiome in Neurogastroenterology – Geoffrey A. Preidis – Pediatric Neurogastroenterology
Review: The endocrine vitamin D system in the gut – Antonio Barbáchano – Molecular and Cellular Endocrinology
Microbes at nearly sterile sites
* Gram-negative bacterial molecules associate with Alzheimer disease pathology – Xinhua Zhan – Neurology
Press: Gram-negative bacteria may influence Alzheimer’s disease pathology – ScienceDaily
Animal and in vitro models
Modulation of a Circulating Uremic Solute via Rational Genetic Manipulation of the Gut Microbiota – A. Sloan Devlin – Cell Host & Microbe
Animal microbiome
* Helminth infections and gut microbiota – a feline perspective – Ana M. Duarte – Parasites & Vectors
Review: Defining the Core Microbiome in Corals’ Microbial Soup – Alejandra Hernandez-Agreda – Trends in Microbiology
Plant, root, and soil microbiome
Bacterial consortia inoculation mitigates the water shortage and salt stress in an avocado (Persea americana Mill.) nursery – Patricio J. Barra – Applied Soil Ecology
Heavy Metal Pollution Structures Soil Bacterial Community Dynamics in SW Spain Polluted Salt Marshes – Jennifer Mesa – Water, Air, & Soil Pollution
The Cucurbita pepo seed microbiome: genotype-specific composition and implications for breeding – Eveline Adam – Plant and Soil
Tolerance of the forest soil microbiome to increasing mercury concentrations – Aline Frossard – Soil Biology and Biochemistry
Repeated glyphosate exposure induces shifts in nitrifying communities and metabolism of phenylpropanoids – Marco Allegrini – Soil Biology and Biochemistry
Seasonal induced changes in spinach rhizosphere microbial community structure with varying salinity and drought – A. Mark Ibekwe – Science of the Total Environment
Cross-compatibility evaluation of plant growth promoting rhizobacteria of coconut and cocoa on yield and rhizosphere properties of vegetable crops – T.H Khadeejath Rajeela – Biocatalysis and Agricultural Biotechnology
Effect of rhizobacterial consortia from undisturbed arid- and agro-ecosystems on wheat growth under differing conditions – N.G. Inostroza – Letters in Applied Microbiology
Differences among Soil-Inhabiting Microbial Communities in Poa annua Turf throughout the Growing Season – Lisa A. Beirn – Corp Science
Increasing the Size of the Microbial Biomass Altered Bacterial Community Structure which Enhances Plant Phosphorus Uptake – Pu Shen – PLOS ONE
Water and extremophile microbiome
* Microbial regime changes and indicators of eutrophication on the Mississippi River identified via a human-powered 2900 km transect – Michael W Henson – bioRxiv
Whole-Genome Enrichment Provides Deep Insights into Vibrio cholerae Metagenome from an African River – L. Vezzulli – Microbial Ecology
Identity, ecology and ecophysiology of planktic green algae dominating in ice‑covered lakes on James Ross Island (northeastern Antarctic Peninsula) – Linda Nedbalová
Built environment microbiome
Analysis of dark crusts on the church of Nossa Senhora do Carmo in Rio de Janeiro, Brazil, using chemical, microscope and metabarcoding microbial identification techniques – Christine Gaylarde – International Biodeterioration & Biodegradation
Impact of wastewater treatment plant discharge on the contamination of river biofilms by pharmaceuticals and antibiotic resistance – Elodie Aubertheau – Science of the Total Environment
More microbiology
Human to human transmission of arthropod-borne pathogens – Byron E Martina – Current Opinion in Virology
Techniques
Methodological flaws introduce strong bias into molecular analysis of microbial populations – Niclas Krakat – Journal of Applied Microbiology
Microbes in the news
Missing Link in Malaria Evolution Discovered in Historical Specimens – Ben Andrew Henry – The Scientist
Book review: The Human Microbiome Handbook, Jason Tetro, Emma Allen-Vercoe (Eds.). DEStech Publications (March 2016)– Laura M. Cox – Anaerobe
Our ideas about bacteria evolution are wrong – scientists make new discovery – Sandra Hajda – Inquisitr
Bacteria Hysteria
Soap company uses bacteria-coated billboards to prove how dirty your stuff is – Mashable
This has become a CED site (CED = Check Each Day)! Thank you Dr. Bik.
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