Have a good weekend! Today we have a very interesting list of reviews about different aspects of the microbiome. We have also: the effects of edible crickets on microbiota, steatosis in mice induced by obese human microbiota, the effect of probiotics on patients with fibromyalgia, food chemicals and human microbiota and more…
Human and General Microbiome
Review: Host-Gut Microbiota Crosstalk in Intestinal Adaptation – Justine Marchix – CMGH
Review: The Brain-Gut-Microbiome Axis – Clair R. Martin – CMGH
Brief Report: A Gut Feeling: A Hypothesis of the Role of the Microbiome in Attention-Deficit/Hyperactivity Disorders – Xue Ming – Child Neurology Open
Preview: Intestinal Tolerance, with a Little Help from Our Microbial Friends – Hélène Descamps – Immunity
Review: Re-framing the theory of autoimmunity in the era of the microbiome: persistent pathogens, autoantibodies, and molecular mimicry – Amy D Proal – Discovery Medicine
Review: The gut microbiota in neuropsychiatric disorders – Marta Grochowska – Acta Neurobiologiciae Expermentalis
Review: Gut Microbiota and Mucosal Immunity in the Neonate – Majda Dzidic – Medical Sciences
Food Chemicals Disrupt Human Gut Microbiota Activity And Impact Intestinal Homeostasis As Revealed By In Vitro Systems – Clémence Defois – Scientific Reports
Research Highlight: Delivery of the gut microbiome – Ashley York – Nature Reviews Microbiology
Review: Microbiota-Host Crosstalk: A Bridge Between Cardiovascular Risk Factors, Diet, and Cardiovascular Disease – Jacques Amar – American Journal of Hypertension
Metaproteomics reveals associations between microbiome and intestinal extracellular vesicle proteins in pediatric inflammatory bowel disease – Xu Zhang – Nature Communications
Animal Microbiome / Animal Experiments
Non-canonicaly recruited TCRαβCD8αα IELs recognize microbial antigens – Lukasz Wojciech – Scientific Reports
Bilophila wadsworthia aggravates high fat diet induced metabolic dysfunctions in mice – Jane M. Natividad – Nature Communications
Beneficial Impact and Molecular Mechanism of Bacillus coagulans on Piglets’ Intestine – Tao Wu – International Journal of Molecular Sciences
Collaborating genomic, transcriptomic and microbiomic alterations lead to canine extreme intestinal polyposis – Jin Wang – Oncotarget
Effects of Intravenous Infusion With Sodium Butyrate on Colonic Microbiota, Intestinal Development- and Mucosal Immune-Related Gene Expression in Normal Growing Pigs – Xue Chen – Frontiers in Microbiology
Microbiome Composition in Both Wild-Type and Disease Model Mice Is Heavily Influenced by Mouse Facility – Kristopher D. Parker – Frontiers in Microbiology
Genetically Obese Human Gut Microbiota Induces Liver Steatosis in Germ-Free Mice Fed on Normal Diet – Ruirui Wang – Frontiers in Microbiology
Microbial Community Composition Reveals Spatial Variation and Distinctive Core Microbiome of the Weaver Ant Oecophylla smaragdina in Malaysia – Kah-Ooi Chua – Scientific Reports
Antibiotic-induced microbiome depletion alters metabolic homeostasis by affecting gut signaling and colonic metabolism – Amir Zarrinpar – Nature Communications
Food Microbiome
Analysis of microbiota on lettuce (Lactuca sativa) cultivated in South Korea to identify foodborne pathogens – Yeon-Cheol – Journal of Microbiology and Biotechnology
Impact of chlorine dioxide disinfection of irrigation water on the epiphytic bacterial community of baby spinach and underlying soil – Pilar Truchado – PLoS One
Beneficial Microbes and Compounds
Perspective: Green and black tea phenolics – Bioavailability, transformation by colonic microbiota, and modulation of colonic microbiota – Zhibin Liu – Journal of Agricultural and Food Chemistry
Therapeutic effects of probiotics on neurotoxicity induced by clindamycin and propionic acid in juvenile hamsters – Nora Al-Orf – Metabolic Brain Disease
Impact of Edible Cricket Consumption on Gut Microbiota in Healthy Adults, a Double-blind, Randomized Crossover Trial – Valerie J. Stull – Scientific Reports
Nisin, a potent bacteriocin and anti-bacterial peptide, attenuates expression of metastatic genes in colorectal cancer cell lines – Zohreh Norouzi – Microbial Pathogenesis
A Pilot Randomized Controlled Trial to Explore Cognitive and Emotional Effects of Probiotics in Fibromyalgia – Pablo Roman – Scientific Reports
Fiber Supplements Derived From Sugarcane Stem, Wheat Dextrin and Psyllium Husk Have Different In Vitro Effects on the Human Gut Microbiota – Hasinika K. A. H. Gamage – Frontiers in Microbiology
Environmental Microbiology
Effects of Pseudomonas chenduensis and biochar on cadmium availability and microbial community in the paddy soil – Lingjuan Li – Science of The Total Environment
Breeding for soil-borne pathogen resistance impacts active rhizosphere microbiome of common bean – Lucas William Mendes – The ISME Journal
Pathogen Research
Exopolysaccharide protects Vibrio cholerae from exogenous attacks by the type 6 secretion system – Jonida Toska – PNAS
The Synergistic Effect of Exogenous Glutamine and Rifampicin Against Mycobacterium Persisters – Xue Huang – Frontiers in Microbiology
Bioinformatics
Preprint: MetaMaps – Strain-level metagenomic assignment and compositional estimation for long reads – Alexander Dilthey – BioRxiv