June 22, 2019

Have a nice Saturday! Today, in this Digest: A set of reviews about the relationship between the microbiome and autism-related complications, Helicobacter infection, non-alcoholic fatty liver disease and hypertension; a study about potential microbiome changes on fibromyalgia, the microbiota of milk in primates, the relationship between genomic and microbiome content in pigs and an interesting report about the effect of microbiota on cirrhosis-associated neuroinflammation.

 

Human and General Microbiome

Review: Can we reduce autism-related gastrointestinal and behavior problems by gut microbiota based dietary modulation? A review – Nalan Hakime Nogay – Nutritional Neuroscience

Review: A Novel View of Human Helicobacter pylori Infections: Interplay between Microbiota and Beta-Defensins – Raffaela Pero – Biomolecules

Review: Fecal Microbial Transplantation For Diseases Beyond Recurrent Clostridium Difficile Infection – Geert R. D’Haens – Gastroenterology

Review: Microbiota and nonalcoholic fatty liver disease: promising prospects for clinical interventions? – Christelle Knudsen – Current Opinion in Clinical Nutrition and Metabolic Care

Review: Impaired Autonomic Nervous System-Microbiome Circuit in Hypertension – Jasenka Zubcevic – Circulation Research

Altered microbiome composition in individuals with fibromyalgia – Amir Minerbi – Pain

Controlling intestinal colonization of high-risk haematology patients with ESBL-producing Enterobacteriaceae: a randomized, placebo-controlled, multicentre, Phase II trial (CLEAR) – Vassiliki Dimitriou – The Journal of Antimicrobial Chemotherapy

Editorial: Microbiota and the clock: sexual dimorphism matters! – Benjamin D. Weger – Aging

Microbiomes, Community Ecology, and the Comparative Method – Sarah M. Hird – mSystems

Technology Feature: Engineers embrace microbiome messiness – Vivien Marx – Nature Methods

Urolithin B suppresses tumor growth in hepatocellular carcinoma through inducing the inactivation of Wnt/β-catenin signaling – Min‐yi Lv – Journal of Cellular Biochemistry

 

Animal Microbiome / Animal Experiments

Diversity and temporal dynamics of primate milk microbiomes – Carly R. Muletz‐Wolz – American Journal of Primatology

Association between the pig genome and its gut microbiota composition – Daniel Crespo-Piazuelo – Scientific Reports

Misoprostol protects mice against severe Clostridium difficile infection and promotes recovery of the gut microbiota after antibiotic perturbation – Joseph P. Zackular – Anaerobe

Neuroinflammation in Murine Cirrhosis is Dependent on the Gut Microbiome and is Attenuated by Fecal Transplant – Runping Liu – Hepatology

Modulation of Lactobacillus acidophilus KLDS 1.0738 on intestinal SCFAs metabolism and GPR41/43 expression in β-lactoglobulin-sensitized mice – Jun‐juan Wang – Microbiology and Immunology

Effect of a proanthocyanidin-rich polyphenol extract from avocado on the production of amino acid-derived bacterial metabolites and the microbiota composition in rats fed a high-protein diet – María José Cires – Food & Nutrition

Environmental microcystin targets the microbiome and increases the risk of intestinal inflammatory pathology via NOX2 in underlying murine model of Nonalcoholic Fatty Liver Disease – Sutapa Sarkar – Scientific Reports

Probiotic supplementation improves the cognitive function and the anxiety-like behaviors in the stressed rats Mahsa Hadizadeh – Iranian Journal of Basic Medical Sciences

 

Bioinformatics

MetaNN: accurate classification of host phenotypes from metagenomic data using neural networks – Chieh Lo – BMC Bioinformatics

Screening methods for detection of ancient Mycobacterium tuberculosis complex fingerprints in next-generation sequencing data derived from skeletal samples – Paulina Borówka – Gigascience

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