June 10, 2019

This Monday, read about the precision of microbiome wording, cryopreservation of the human gut microbiota, water infrastructure microbiomes, and more. Happy reading!

General microbiome

Determining Microbial Roles in Ecosystem Function: Redefining Microbial Food Webs and Transcending Kingdom Barriers – Kim M. Handley – mSystems

Digitalizing the Microbiome for Human Health – Kirti Nath and Christoph A. Thaiss – mSystems

New Approaches to Microbiome-Based Therapies – Andrea C. Wong and Maayan Levy – mSystems

Benefits and Costs of Animal Virulence for Microbes – Arturo Casadevall and Liise-anne Pirofski – mSystems

*Language, numeracy and logic in microbiome science – Fergus Shanahan and Colin Hill – Nature Reviews Gastroenterology & Hepatology

Gut microbiome

*Cryopreservation of the human gut microbiota: current state and perspectives – Daria V.Smirnovaa – International Journal of Medical Microbiology

Metaproteomics of the human gut microbiota: challenges and contributions to other OMICS – Ngom Issa Isaac – Clinical Mass Spectrometry

Mapping human microbiome drug metabolism by gut bacteria and their genes – Michael Zimmermann – Nature

MinION Sequencing of colorectal cancer tumour microbiomes – a comparison with amplicon-based and RNA-Sequencing – William S Taylor – bioRxiv

Assessment of Causal Direction Between Gut Microbiota-Dependent Metabolites and Cardiometabolic Health: Abi-Directional Mendelian Randomisation Analysis – Jinzhu Jia – Diabetes

Metagenomic and metabolomic analyses reveal distinct stage-specific phenotypes of the gut microbiota in colorectal cancer – Shinichi Yachida – Nature Medicine

Dysbiosis of gut microbiota in a selected population of Parkinson’s patients – Daniele Pietrucci – Parkinsonism & Related Disorders

Animal experiment

Heterochronic faecal transplantation boosts gut germinal centres in aged mice – Marisa Stebegg – Nature communications

High fat diet alters gut microbiota but not spatial working memory in early middle-aged Sprague Dawley rats – Nikita Girish Deshpande – PlosOne

Animal microbiome

Fibre digestion by rumen microbiota – a review of recent metagenomic and metatranscriptomic studies – Stephanie A Terry – Canadian Journal of Animal Science

Correlation between Disease Severity and the Intestinal Microbiome in Mycobacterium tuberculosis-Infected Rhesus Macaques – Sivaranjani Namasivayam – mBio

Water microbiome

*Integrating biotechnology and microbial ecology in urban water infrastructure through a microbiome continuum viewpoint – Lutgarde Raskin and Per Halkjær Nielsen – Current Opinion in Biotechnology

Techniques

MOBN: an interactive database of multi-omics biological networks – Cheng Zhang – bioRxiv

Advertisements

Leave a Reply

Fill in your details below or click an icon to log in:

WordPress.com Logo

You are commenting using your WordPress.com account. Log Out /  Change )

Google photo

You are commenting using your Google account. Log Out /  Change )

Twitter picture

You are commenting using your Twitter account. Log Out /  Change )

Facebook photo

You are commenting using your Facebook account. Log Out /  Change )

Connecting to %s