Highlights: Microbial colonization in infants, prokaryotes of oxygen depleted water in Bay of Bengal, biodegradation of petroleum hydrocarbons, microbial communities across a range of saline soils, trait based approaches in wastewater treatment bioreactors to understand the changes in bacterial community composition. You can also read a handful of career based news in today’s non-microbe picks.
General microbiome
Petroleum Microbiology Under Extreme Conditions – Microbial Action on Hydrocarbons
Pregnancy and early life
Genome-resolved metagenomics of eukaryotic populations during early colonization of premature infants and in hospital rooms – Matthew R Olm – Microbiome
Review: Establishment of an ideal gut microbiota to boost healthy growth of neonates – Thi Thanh Binh Nguyen – Critical Reviews in Microbiology
Necrotizing Enterocolitis Pathophysiology: How Microbiome Data Alter Our Understanding – Christina S. Kim MD – Clinics in Perinatology
Human skin microbiome
Rapid discrimination of fungal strains isolated from human skin based on microbial volatile organic profiles – Joao Raul Belinato – Journal of Chromatography B
Human gut microbiome
A pilot study on clinicopathological features and intestinal microflora changes in colorectal cancer patients born over a nine-year period encompassing three years before and after the Great Chinese famine – Jiante Li – Cancer Epidemiology
Animal experiments
Ameliorating gut microenvironment through staphylococcal nuclease-mediated intestinal NETs degradation for prevention of type 1 diabetes in NOD mice – Yixuan Liang – Life Sciences
Oral administration of antibiotics increased the potential mobility of bacterial resistance genes in the gut of the fish Piaractus mesopotamicus – Johan S. Sáenz – Microbiome
Animal microbiome
Effects of a Saccharomyces cerevisiae fermentation product on fecal characteristics, nutrient digestibility, fecal fermentative end-products, fecal microbial populations, immune function, and diet palatability in adult dogs – Ching-Yen Lin – Journal of Animal Science
Bacterial community analysis for investigating bacterial transfer from tonsils to the pig carcass – Anne Mette Jakobsen – International Journal of Food Microbiology
Plant, root, and soil microbiome
Spatial distribution of prokaryotic communities in hypersaline soils – Blanca Vera-Gargallo – Scientific Reports
Dynamics of soil microbial communities following vegetation succession in a karst mountain ecosystem, Southwest China – Chang Zhao – Scientific Reports
Diversity and Functionality of Culturable Endophytic Bacterial Communities in Chickpea Plants – Clarisse Brígido – MDPI
Robust archaeal and bacterial communities inhabit shallow subsurface sediments of the Bonneville Salt Flats – Julia M. McGonigle – bioRxiv
Impact of intercropping on the coupling between soil microbial community structure, activity, and nutrient-use efficiencies – Tengxiang Lian – PeerJ
Alteration of Crop Rotation in Continuous Pinellia ternate Cropping Soils Profiled via ITS Amplicon Sequencing – Zhigui He – Letters in Applied Microbiology
Assessment of the Diversity of Fungal Community Composition Associated With Vachellia pachyceras and Its Rhizosphere Soil From Kuwait Desert – Majda K. Suleiman – Frontiers in Microbiology
Water and extremophile microbiome
Prokaryotic Diversity in Oxygen Depleted Waters of the Bay of Bengal Inferred Using Culture-Dependent and -Independent Methods – Indian Journal of Microbiology
Microbial Consortia and Biodegradation of Petroleum Hydrocarbons in Marine Environments – Microbial Action on Hydrocarbons
Built environment
Trait-based life-history strategies explain succession scenario for complex bacterial communities under varying disturbance – Ezequiel Santillan – bioRxiv
Non-Microbiology picks
To move research from quantity to quality, go beyond good intentions – Nature
How business-savvy scientists can find success in the risky start-up world – Nature
A disadvantaged background doesn’t have to be a barrier to success – Nature
Announcing the 2019 ScientistAtWork photo competition – Nature
Huge variations in US postdoc salaries point to undervalued workforce – Nature