March 21, 2017

Events and jobs

Microbiology Department Manager – Medlab Pathology – Sydney

General microbiome

The ecology of human microbiota: dynamics and diversity in health and disease – A Karkman – Annals of the New York Academy of Sciences

Human gut microbiome

The gut microbiome in human neurological disease: A review – H Tremlett – Annals of Neurology

Shaping the Metabolism of Intestinal Bacteroides Population through Diet to Improve Human Health – DR Covian – Frontiers in Microbiology

Animal microbiome

Effects of a protected inclusion of organic acids and essential oils as antibiotic growth promoter alternative on growth performance, intestinal morphology and gut microflora in broilers – Y Liu – Animal Science Journal

Extreme drought, host density, sex, and bullfrogs influence fungal pathogen infection in a declining lotic amphibian – AJ Adams – Ecosphere

Neoagarotetraose protects mice against intense exercise-induced fatigue damage by modulating gut microbial composition and function – N Zhang – Molecular Nutrition and Food Research

Effects of Gliadin consumption on the Intestinal Microbiota and Metabolic Homeostasis in Mice Fed a High-fat Die –  L Zhang – Scientific Reports

Plant, root and soil microbiome

*ReviewRhizogenic agrobacteria in hydroponic crops: epidemics, diagnostics and control – L Bosmans – Plant Pathology

Mn accumulation in a submerged plant Egeria densa (Hydrocharitaceae) is mediated by epiphytic bacteria – K Tsuji – Plant, Cell and Environment

Water microbiome and extremophiles

Microbial players and processes involved in phytoplankton bloom utilization in the water column of a fast-flowing, river-dominated estuary – MW Smith – Microbiology Open

Metagenomics of Hyperthermophilic Environments: Biodiversity and Biotechnology – A Strazzulli – Microbial Ecology of Extreme Environments

Sediment depth and habitat as predictors of the diversity and composition of sediment bacterial communities in an inter-tidal estuarine environment – DFR Cleary – Marine Ecology

Crenarchaeal Viruses of Hot Springs: Diversity, Ecology and Co-evolution –  AC Ortmann – Microbial Ecology of Extreme Environments

*ReviewMarine Prasinoviruses and Their Tiny Plankton Hosts: A Review – KD Weynberg – Viruses

Microbial Electron Transport in the Deep Subsurface – J Hinks – Microbial Ecology of Extreme Environments

New Insights into the Microbial Diversity of Polar Desert Soils: A Biotechnological Perspective – J v Dorst – Microbial Ecology of Extreme Environments

Transcriptomics

Mechanism for microbial population collapse in a fluctuating resource environment – S Turkarslan – Molecular Systems Biology

Techniques

SILVA, RDP, Greengenes, NCBI and OTT — how do these taxonomies compare? – M Balvociute – BMC Genomics

Prediction of virus-host infectious association by supervised learning methods – M Zhang – BMC Bioinformatics

Comparison of methods for identification of microbial communities in book collections: Culture-dependent (sequencing and MALDI-TOF MS) and culture-independent (Illumina MiSeq) – L Krakova – International Biodeterioration & Biodegradation

More microbes

*Review: The role of bacillithiol in Gram-positive Firmicutes – P Chandrangsu – Antioxidants & Redox Signaling

The effect of antibiotics and diet on enterolactone concentration and metabolome studied by targeted and non-targeted LC-MS metabolomics – AK Bolviq – Journal of Proteome Research

Exploring the Viral Ecology of High Latitude Aquatic Systems – C Chenard – Microbial Ecology of Extreme Environments

The Nature and Relevance of Solvent Stress in Microbes and Mechanisms of Tolerance – M Manefield – Microbial Ecology of Extreme Environments

Surveillance of Exhibit Associated Aquatic Viruses Using Next Generation Sequencing Technologies – WV Bonn – IAAAM 2016

Microbes in the news

Before you consume billions of live bacteria … – E Cauthorn – Las Vegas Sun

Bacteria between humans and pets? Could improve global health: researchers – M Shah – Toronto Sun

There is a reason dogs like meat – NZ Herald

ANTIBIOTIC APOCALYPSE: Harvard reveals doomsday scenario that could KILL 10 million a year – O Smith – Express

THE ALTERATION OF THE INTESTINAL MICROBIOTA COULD PROTECT METABOLIC DISEASES – Zoe – The Quebec Times

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