Highlights: Harnessing principles of ecology and engineering in building microbiome, community ecology perspective of human microbiome, rhizospheric microbes, soil viruses and many more.
General microbiome
Regulating microbiome manipulation – Kjersti Aagaard – Nature Medicine
Towards a Better Understanding of Microbial Community Dynamics through High-Throughput Cultivation and Data Integration – Karoline Faust – mSystems
Reconciling Ecological and Engineering Design Principles for Building Microbiomes – Hans C. Bernstein – mSystems
Community ecology as a framework for human microbiome research – Jack A Gilbert – Nature Medicine
Multi-site human microbiome
Age-dependent dissimilarity of the nasopharyngeal and middle ear microbiota in children with acute otitis media – Silvio D. Brugger – Frontiers in Genetics
Human gut microbiome
Micronutrient requirements and sharing capabilities of the human gut microbiome – Dmitry A Rodionov – Frontiers in Microbiology
Animal experiments
Mouse microbiomes: overlooked culprits of experimental variability –
Animal microbiome
Microbial communities associated with the parasitic copepod Lepeophtheirus salmonis – S. Dalvin – Marine Genomics
Gut microbiome differences between wild and captive black rhinoceros – implications for rhino health – Keylie M. Gibson – Scientific Reports
Not all animals need a microbiome – Tobin J Hammer – FEMS Microbiology Letters
The Microbiome of the Maculinea-Myrmica Host-Parasite Interaction – Marco Di Salvo – Scientific Reports
Plant, root, and soil microbiome
Soil photosynthetic microbial communities mediate aggregate stability: influence of cropping systems and herbicide use in an agricultural soil – Olivier Crouzet – Frontiers in Microbiology
Fluazinam positively affected the microbial communities in clubroot cabbage rhizosphere – Chunming Liu – Scientia Horticulturae
Soil microbiome mediates positive plant diversity‐productivity relationships in late successional grassland species – Guangzhou Wang – Ecology Letters
A water stress-adapted inoculum affects rhizosphere fungi, but not bacteria nor wheat – Charlotte Giard-Laliberté – Microbiology Ecology
Variations in phyllosphere microbial community along with the development of angular leaf-spot of cucumber – Luyun Luo – AMB Express
Built environment
Effects of biochar on the phenol treatment performance and microbial communities shift in sequencing batch reactors – Shengnan Shi – Water Research
Effects of ozone treatment on performance and microbial community composition in biofiltration systems treating ethyl acetate vapours – Itzel Covarrubias-García – Chemosphere
Phages and viruses
Characterization of the virome of Paracoccus spp. (Alphaproteobacteria) by combined in silico and in vivo approaches – Przemyslaw Decewicz – Scientific Reports
Soil Viruses: A New Hope – Joanne B. Emerson – mSystems