Today’s digest features the human gut microbiome atlas of Africa, sociobiome, a large human gut Bacteroidales culture collection, Patescibacteria in global waste water treatment plants, and more.
This month, the May 2024 contribution period of Outreachy started! Outreachy, as an internship program, supports diversity in open source & open science!
See you at #MVIF!
Gut microbiome
Expanding the human gut microbiome atlas of Africa โ Dylan G Maghini โ bioRxiv
Review: The individual response to antibiotics and diet โ insights into gut microbial resilience and host metabolism โ Lars M. M. Vliex โ Nature Reviews Endocrinology
The impact of different antimicrobial exposures on the gut microbiome in the ARMORD observational study โ Leon Peto โ medRxiv
Multi-omics analysis of the gut microbiome and metabolites associated with the psychoneurological symptom cluster in children with cancer receiving chemotherapy โ Jinbing Bai โ Journal of Translational Medicine
Longitudinal analysis of the gut microbiome in adolescent patients with anorexia nervosa: microbiome-related factors associated with clinical outcome โ Nadia Andrea Andreani โ Gut Microbes
Healthy microbiome – moving towards functional interpretation โ Kinga Zieliลska โ bioRxiv
Sociobiome – Individual and neighborhood socioeconomic status influence the gut microbiome in a multi-ethnic population in the US โ Soyoung Kwak โ npj Biofilms and Microbiomes
Cryptic diversity of cellulose-degrading gut bacteria in industrialized humans โ Sarah Morais โ Science
Comprehensive analyses of a large human gut Bacteroidales culture collection reveal species and strain level diversity and evolution โ Zhenrun J. Zhang โ bioRxiv
Animal experiment
A history of repeated antibiotic usage leads to microbiota-dependent mucus defects โ Kertu Liis Krigul โ bioRxiv
Water microbiome
Global abundance patterns, diversity, and ecology of Patescibacteria in wastewater treatment plants โ Huifeng Hu โ Microbiome
Bioinformatics
Review: Challenges in computational discovery of bioactive peptides in โomics data โ Luis Pedro Coelho โ Proteomics
For long-term sustainable software in bioinformatics โ Luis Pedro Coelho โ Plos Computational Biology
Data-driven prediction of colonization outcomes for complex microbial communities โ Lu Wu โ Nature Communications
Microbiome Digest - Bik's Picks 