November 20, 2023

Human and General Microbiome

Association between microbiome and the development of adverse posttraumatic neuropsychiatric sequelae after traumatic stress exposure – Abigail L Zeamer – Translational Psychiatry

The preterm human milk microbiota fluctuates by postpartum week and is characterized by gestational age and maternal BMI – Evgenia Jen Filatava – mBio

Strain-resolved metagenomic analysis of the gut as a reservoir for bloodstream infection pathogens among premature infants in Singapore – Sarah M Heston – Gut Pathogens

Porphyromonas gingivalis as a promotor in the development of the alcoholic liver disease via ferroptosis – Chao Yao – Microbes and Infection

The core phageome and its interrelationship with preterm human milk lipids – Wen C Yew – Cell Reports

Longitudinal analysis at three oral sites links oral microbiota to clinical outcomes in allogeneic hematopoietic stem-cell transplant – Vitor Heidrich – Microbiology Spectrum

Gut inflammation associated with age and Alzheimer’s disease pathology: a human cohort study – Margo B Heston – Scientific Reports

Robust airway microbiome signatures in acute respiratory failure and hospital-acquired pneumonia – Emmanuel Montassier – Nature Medicine

Beneficial Microbes and Compounds

Systematic mining of the human microbiome identifies antimicrobial peptides with diverse activity spectra – Andrew M King – Nature Microbiology

Skin benefits of postbiotics derived from Micrococcus luteus derived from human skin: an untapped potential for dermatological health – Young Mok Heo – Genes & Genomics

Akkermansia muciniphila attenuated lipopolysaccharide-induced acute lung injury by modulating the gut microbiota and SCFAs in mice – Jian Shen – Food & Function

Review: The Potential of Meta-Proteomics and Artificial Intelligence to Establish the Next Generation of Probiotics for Personalized Healthcare – Arpita Das – Journal of Agricultural and Food Chemistry

Review: Gut microbiome in healthy aging versus those associated with frailty – Mi Young Lim – Gut Microbes

Animal Microbiome

Host species and habitat shape fish-associated bacterial communities: phylosymbiosis between fish and their microbiome – Javad Sadeghi – Microbiome

Aedes aegypti microbiome composition covaries with the density of Wolbachia infection – Jane Pascar – Microbiome

Sequential host-bacteria and bacteria-bacteria interactions determine the microbiome establishment of Nematostella vectensis – H Domin – Microbiome

Microbial symbionts are shared between ants and their associated beetles – Catalina Valdivia – Environmental Microbiology

The gut microbiome mediates adaptation to scarce food in Coleoptera – Oana Teodora Moldovan – Environmental Microbiome

Animal Model Microbiome

Interplay of gut microbiota and host epithelial mitochondrial dysfunction is necessary for the development of spontaneous intestinal inflammation in mice – Kibrom M Alula – Microbiome

Environmental Microbiome

Microbial diversity and community structure dynamics in acid mine drainage: Acidic fire with dissolved heavy metals – Wasim Sajjad – The Science of the Total Environment

Polar lake microbiomes have distinct evolutionary histories – Bjorn Tytgat – Science Advances

Plant Microbiome

PSKR1 balances the plant growth-defence trade-off in the rhizosphere microbiome – Siyu Song – Nature Plants

Streptomyces alleviate abiotic stress in plant by producing pteridic acids – Zhijie Yang – Nature Communications

Microbiome Analysis: tools, techniques and resources

The pan-microbiome profiling system Taxa4Meta identifies clinical dysbiotic features and classifies diarrheal disease – Qinglong Wu – The Journal of Clinical Investigation

Review: Machine learning for microbiologists – Francesco Asnicar – Nature Reviews. Microbiology

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