General microbiome
Evolutionary genetic analysis uncovers multiple species with distinct habitat preferences and antibiotic resistance phenotypes in the Stenotrophomonas maltophilia complex – LE Ochoa-Sanchez – bioRxiv
Review: Regulation of inflammation by microbiota interactions with the host – JM Blanders – Nature Immunology
Dramatic expansion of microbial groups that shape the global sulfur cycle – K Anantharaman – bioRxiv
The importance of species identity and interactions on multifunctionality depends on how ecosystem functions are valued – EM Slade – Ecology
The potential of anti-infectives and immunomodulators as therapies for asthma and asthma exacerbations – MR Edwards – Allergy
Pest categorisation of Pseudocercospora angolensis – EPH – EFSA Journal
Vascular complications in diabetes: old messages, new thoughts – JM Forbes – Diabetologia
Deciphering functional diversification within the lichen microbiota by meta-omics – T Cernava – Microbiome
Human oral microbiome
Saliva and tooth biofilm bacterial microbiota in adolescents in a low caries community – L Erikkson – Scientific Reports
Animal microbiome
Using MinION to characterize dog skin microbiota through full-length 16S rRNA gene sequencing approach – A Cusco – bioRxiv
Context-dependent Requirements for FimH and Other Canonical Virulence Factors in Gut Colonization by Extraintestinal Pathogenic Escherichia coli – CW Russell – bioRxiv
Graded replacement of maize grain with molassed sugar beet pulp modulated ruminal microbial community and fermentation profile in vitro – M Münnich – J Sci Food Agric.
Microbial Communities in Different Tissues of Atta sexdens rubropilosa Leaf-cutting Ants – AS Vieira – Current Microbiology
Fecal excretion of Maillard reaction products and the gut microbiota composition of rats fed with bread crust or bread crumb – C Helou – Food & Function
The salivary microbiome as an indicator of carcinogenesis in patients with oropharyngeal squamous cell carcinoma: A pilot study – A Wolf – Scientific Reports
16S rRNA gene-based association study identified microbial taxa associated with pork intramuscular fat content in feces and cecum lumen – S Fang – BMC Microbiology
Plant, root and soil microbiome
Environmental drivers of viral community composition in Antarctic soils identified by viromics – EM Adriaenssens – Microbiome
Water microbiome and extremophiles
Metabolic Network Analysis and Metatranscriptomics Reveals Auxotrophies and Nutrient Sources of the Cosmopolitan Freshwater Microbial Lineage acI – JJ Hamilton – bioRxiv
Techniques
Effective identification of Lactobacillus casei group species: genome-based selection of the gene mutL as the target of a novel multiplex PCR assay – B Bottari – Microbiology
Comparative analysis of vaginal microbiota sampling using 16S rRNA gene analysis – S Virtanen – PLoS One
Microbes in news
UCONN RESEARCH: IN FROGS, EARLY ACTIVITY OF GUT MICROBIOME SHAPES LATER HEALTH – UConn
Fecal bacteria found in drinks at UK branches of McDonald’s, Burger King and KFC – D Reid – CNBC
Google’s Verily Trying to Debug Fresno with Bacteria-Treated Mosquitoes – C Wallentine – Invisiverse
South Florida hiker contracts flesh-eating bacteria – R Lowe – WSVN