Prevotella and Bacteroides associations with diet, parasite-microbiota interactions in wild animals, Staphylococcus/fungus interactions in cheese rind.
General microbiome
The Underestimation of Global Microbial Diversity– Jay T. Lennon -mBio
Next-Generation High-Throughput Functional Annotation of Microbial GenomesNext-Generation High-Throughput Functional Annotation of Microbial Genomes – Ralph S. Baric – mBIo
Human vaginal microbiome
The vaginal microbiota, human papillomavirus infection and cervical intraepithelial neoplasia: what do we know and where are we going next? – Anita Mitra – Microbiome
Human gut microbiome
Unusual sub-genus associations of faecal Prevotella and Bacteroides with specific dietary patterns – Francesca De Filippis – Microbiome
(PubMed link) Early Changes in Microbial Community Structure Are Associated with Sustained Remission After Nutritional Treatment of Pediatric Crohn’s Disease – Dunn KA – Inflammatory Bowel Diseases
(PubMed link) Review: The role of the gut microbiota in food allergy – Rachid R – Curr Opin Pediatr
Review: Intestinal Microbiome Changes and Stem Cell Transplantation: Lessons Learned – Ying Taur – Virulence
Human urinary tract microbiome
Review: Urinary Tract Infection: Pathogenesis and Outlook – Lisa K. McLellan – Trends in Molecular Medicine
Animal microbiome
Parasite-microbiota interactions potentially affect intestinal communities in wild mammals – Tuomas Aivelo – bioRxiv
Plant, root, and soil microbiome
Microbial community dynamics in the rhizosphere of a cadmium hyper-accumulator – J. L. Wood – Scientific Reports
Food microbiology
Cheese: Biotic Interactions Shape the Ecological Distributions of Staphylococcus Species – Erik K. Kastman – mBio
Press: Fungi boost bacterium. A study of 25 cheeses finds that a slow-growing bacterium can outcompete its relatives with the help of fungi – Nature
Storage techniques
Comparison of Collection Methods for Fecal Samples for Discovery Metabolomics in Epidemiologic Studies – Erikka Loftfield – Cancer Epidemiology, Biomarkers & Prevention
Microbes in the news
Why Gut Bacteria Are Having a Moment. Jessica Richman, CEO of uBiome at Fortune’s Brainstorm Health summit- Beth Kowitt – Fortune
The Life, the Sea and the Space Viking, Searching for Extremophiles – Seti
Are You Ready to Swallow a Pill Full of Poop? OpenBiome believes in the power of pure, barely processed poop – Katie M. Palmer – Wired
Gut microbiome profiles predict response to low FODMAP diet in IBS – Healio
Study links intestinal microbial population to production of inflammatory proteins – Economic TImes
Guts of Fecal Transplant Patients Resemble their Donors’ – HCP Live – Refers to this paper: http://bmcmedicine.biomedcentral.com/articles/10.1186/s12916-016-0698-z
Microbiome Skincare: Is Bacteria the Key to Perfect Skin? A primer on the science that could fix our skin woes once and for all – Wing Sze Tang – Flare
Thank you very much for keeping the academic focus of this blog even though you moved to an industrial position! I absolutely appreciate your efforts greatly and I hope your new employer does too!
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