Microbiome digest, September 24, 2014

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Today we will learn how to feed shit to flies, the gut microbes of Mexican monkeys, and soil microbes and climate change.

Human microbiome general

Microbes Central to Human Reproduction – Gregor Reid – American Journal of Reproductive Immunology

“A meeting of the International Scientific Association for Probiotics and Prebiotics held in Aberdeen, Scotland (June 2014), presented new views and challenged established concepts on the role of microbes in reproduction and health of the mother and infant. “

Mammal microbiome

The role of gut microbes in satisfying the nutritional demands of adult and juvenile wild, black howler monkeys (Alouatta pigra) – Katherine R. Amato – American Journal of Physical Anthropology

“..we examined differences in activity budget, diet, and the gut microbial community among adult male .., adult female .., and juvenile .. wild black howler monkeys (Alouatta pigra) across a ten-month period in Palenque National Park, Mexico “

Soil microbiome

Incorporating Soil Microbes in Climate Change Models – Joe Turner – The Scientist

“Without a solid understanding of how the soil microbiome contributes to atmospheric carbon, researchers are struggling to determine whether dirt-dwelling bacteria could impact—and be impacted by—climate change.”

Metabolomics

Metabolomic profiles and childhood obesity – Wei Perng – Obesity

“Principal components analysis was used to consolidate 345 metabolites into 18 factors and identified two that differed between obese .. and lean children “

Microbes in the news

A beginners guide to feeding shit to flies – Edan Foley – Frontiers blog

“The title pretty much sums this one up”

Meet my Microbiome – An Introduction to the bacterial zoo hidden in my colon – Edan Foley – Frontiers blog

“As detailed in the previous blog post, I fed a solution of my feces to axenic flies this summer.“

Giving Chickens Bacteria … To Keep Them Antibiotic-Free – Dan Charles – NPR The Salt

“Poultry companies are turning to probiotics as an alternative to antibiotics, which have become increasingly controversial.”

 Three Girls Won The Google Science Fair With A Bacteria-Based Plan To Solve The Food Crisis – Jessica Orwig – Business Insider

“Three young girls won the Google science fair on September 22 with their innovative way to feed the world: treat plants with bacteria to help farmers grow more food, faster”

Honeybees healing bacteria: The antimicrobial properties of honey – Jeremiah Yarmie – The Manitoban

“A research group from Lund University in Sweden has been investigating bacteria found in the honey-producing stomach of bees. “

Science and publishing

The Top Eleven Ways to Tell that a Journal is Fake – Shaili Jain – PLOS Blogs

“If you have ever published a scholarly paper, your email inbox is probably peppered with invitations to submit papers to new journals with plausible-sounding names. “

Women in Science

When words fail: women, science, and women-in-science – Jacquelyn Gill – The Contemplative Mammoth

“I don’t want to write about women in science today. I want to write about glaciers, or passenger pigeons, or the way the tilt of the earth is making the squirrels outside my window stash acorns”

Gender balance among University Research Fellows – Paul Nurse – UK Royal Society

“It was a great day for the 43 scientists who were awarded grants but I, like many Fellows, was personally very disappointed to see that only two of them were women.”

Bik’s Picks

Fossil Dolphin Otekaikea marplesi (Latest Oligocene, New Zealand) Expands the Morphological and Taxonomic Diversity of Oligocene Cetaceans – Yoshihiro Tanaka – PLOS ONE

“The New Zealand fossil dolphin “Prosqualodon” marplesi (latest Oligocene, ≥23.9 Ma) is here identified as a crown odontocete that represents a new genus, Otekaikea”

Review: The design and function of birds’ nests – Mark C. Mainwaring – Ecology and Evolution

“the design of birds’ nests is far more sophisticated than previously realized and that nests are multifunctional structures that have important fitness consequences for the builder/s.”

False memories could be a side-effect of human ability to learn rules – Science Daily

“New research suggests that individuals who are particularly good at learning rules and classifying objects by common properties are also particularly prone to false memory illusions.”

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