Have a nice weekend! Today, the Digest contains several reviews.
Highlights!
Microbiota responses to different prebiotics are conserved within individuals and associated with habitual fiber intake – Zachary C Holmes – Microbiome → A three-way crossover study showed that prebiotic personalization regimens can be beneficial in different manners to different people; this study showed that people with low fiber intake received more effect from those interventions.
Human and General Microbiome
Differential Gut Microbiota Compositions Related With the Severity of Major Depressive Disorder – Qi Zhong – Frontiers in Cellular and Infection Microbiology
Phospholipid metabolites of the gut microbiota promote hypoxia-induced intestinal injury via CD1d-dependent γδ T cells – Yuyu Li – Gut Microbes
Gut bacteria interact directly with colonic mast cells in a humanized mouse model of IBS – Chiko Shimbori – Gut Microbes
Asthma and Wheeze Severity and the Oropharyngeal Microbiota in Children and Adolescents – Jonathan Thorsen – Annals of the American Thoracic Society
Minireview: Role of microbial secreted proteins in gut microbiota-host interactions – Boris Vidal-Veuthey – Frontiers in Cellular and Infection Microbiology
Review: A Bibliometric Analysis of Research on the Links Between Gut Microbiota and Atherosclerosis – Ya Wang – Frontiers in Cardiovascular Medicine
Review: Microbiota-derived metabolites as drivers of gut-brain communication – Hany Ahmed – Gut Microbes
Review: Female reproductive dysfunctions and the gut microbiota – Sangappa B Chadchan – Journal of Molecular Endocrinology
Systematic Review: A Bibliometric Review on Gut Microbiome and Alzheimer’s Disease Between 2012 and 2021 – Alejandro I Trejo-Castro – Frontiers in Aging Neuroscience
Systematic Review: Disturbances of Vaginal Microbiome Composition in Human Papillomavirus Infection and Cervical Carcinogenesis: A Qualitative Systematic Review – Ming Wu – Frontiers in Oncology
Beneficial Microbes and Compounds
Review: Bacterial-fungal metabolic interactions within the microbiota and their potential relevance in human health and disease: a short review – Alexia Lapiere – Gut Microbes
Animal Model Microbiome
Intestinal Inflammation Reversibly Alters the Microbiota to Drive Susceptibility to Clostridioides difficile Colonization in a Mouse Model of Colitis – Madeline R Barron – mBio
Non-Model Animal Microbiome
Comparative and functional analyses of fecal microbiome in Asian elephants – Guiding Li – Antonie van Leeuwenhoek
Bioinformatics and Microbiome Analysis Techniques
Tourmaline: A containerized workflow for rapid and iterable amplicon sequence analysis using QIIME 2 and Snakemake – Luke R Thompson – GigaScience