March 27, 2021

Have a nice weekend! Today, in this Digest, we have an interesting review published in Science about microbiome and cancer. We have also articles about different conditions and the effect of the microbiome in the COVID19 vaccine-based immunity. More papers about: microbiome of wild animals,  cow microbiome and glyphosate,  anorexia microbiome in a mice model, and more!

Human and General Microbiome

Review: The microbiome and human cancer – Gregory D. Sepich-Poore – Science

Alterations in mucosa-associated microbiota in the stomach of patients with gastric cancer – Yilin Deng – Cellular Oncology 

Microbial genetic and transcriptional contributions to oxalate degradation by the gut microbiota in health and disease – Menghan Liu – eLife

The gut microbiome in subclinical atherosclerosis: a population-based multi-phenotype analysis – Sibo Zhu – Rheumatology

The microbiome in atopic patients and potential modifications in the context of the severe acute respiratory syndrome coronavirus 2 pandemic – Euna Lee – Current Opinion in Allergy and Clinical Immunology

An observational study of anaerobic bacteria in cystic fibrosis lung using culture dependant and independent approaches – Claudie Lamoureux – Scientific Reports

The Role of Mucosal Immunity and Recombinant Probiotics in SARS-CoV2 Vaccine Development – Shima Moradi-kalbolandi – Probiotics and Antimicrobial Proteins

Propionate catabolism by CD-associated adherent-invasive E. coli counteracts its anti-inflammatory effect – Allison Agus – Gut Microbes

Metabolic Syndrome Cannot Mask the Changes of Fecal Microbiota Compositions Caused by Primary Hepatocellular Carcinoma – Jiajia Ni – Letters in Applied Microbiology

Mendelian Randomization Analysis Reveals Causal Effects of the Human Gut Microbiota on Abdominal Obesity – Qian Xu – The Journal of Nutrition

Animal Microbiome

Diversity and functional landscapes in the microbiota of animals in the wild – Doron Levin – Science

Preliminary functional analysis of the subgingival microbiota of cats with periodontitis and feline chronic gingivostomatitis – Marjory Xavier Rodrigues – Scientific Reports

No hints at glyphosate-induced ruminal dysbiosis in cows – Fabian Billenkamp – npj Biofilms and Microbiomes 

Animal Models

Gut microbial communities from patients with anorexia nervosa do not influence body weight in recipient germ-free mice – Elaine M. Glenny – Gut Microbes

Environmental Microbiome

Invasive freshwater snails form novel microbial relationships – Laura Bankers – Evolutionary Applications

Preprint: Diversity and metagenome analysis of a hydrocarbon-degrading bacterial consortium from asphalt lakes located in Wietze, Germany – Michael O. Eze – Biorxiv

Built Environment

The Impacts of the Occupants on the Bacterial Communities of Classrooms – Zhou Feng – Current Microbiology 


Meta-analysis methods for multiple related markers: Applications to microbiome studies with the results on multiple α-diversity indices – Hyunwook Koh – Statistics in Medicine

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