November 13, 2021

Human and General Microbiome

Visualized analysis of trends and hotspots in global oral microbiome research: A bibliometric study – Ga Liao – MedComm

A low abundance of genus Bacteroides in gut microbiota is negatively correlated with blood phenylalanine levels in Uygur patients with phenylketonuria – Yajie Su – Translational Pediatrics

Haematopoietic cell transplantation outcomes are linked to intestinal mycobiota dynamics and an expansion of Candida parapsilosis complex species – Thierry Rolling – Nature Microbiology

The composition of lung microbiome in lung cancer: a systematic review and meta-analysis – Sadaf Najafi – BMC Microbiology

A metaproteomic-based gut microbiota profiling in children affected by autism spectrum disorders – Stefano Levi Mortera – Journal of Proteomics

Is there an association between the vaginal microbiome and first trimester miscarriage? A prospective observational study – Monica Shahid – The Journal of Obstetrics and Gynaecology Research

Human and General Microbiome – Reviews

Review: Gut microbiota and vitamin status in persons with obesity: A key interplay – Lise Voland – Obesity Reviews

Review: Insights into the role of vaginal microbiome in women’s health – Namrata Deka – Journal of Basic Microbiology

Review: The gut virome in inflammatory bowel diseases – Guanxiang Liang – Current Opinion in Virology

Beneficial Microbiome and Compounds

Tuber flours improve intestinal health and modulate gut microbiota composition – Tao Xu – Food Chemistry: X

Effects of red ginseng on gut, microbiota, and brain in a mouse model of post-infectious irritable bowel syndrome – Seonhye Yu – Journal of Ginseng Research

Food Microbiome

The inconsistent microbiota of Budu, the Malaysian fermented anchovy sauce, revealed through 16S amplicon sequencing – Muhammad Zarul Hanifah Md Zoqratt – PeerJ

Animal Microbiome (non-models)

Seasonal diet and microbiome shifts in wild rhesus macaques are better correlated at the level of nutrient components than food items – Zhenwei Cui – Integrative Zoology

Wild gut microbiomes reveal individuals, species, and location as drivers of variation in two critically endangered Hawaiian honeycreepers – Maria S Costantini – PeerJ

Plant Microbiome

Opinion: The end of hunger: fertilizers, microbes and plant productivity – Hang-Wei Hu – Microbial Biotechnology

Enrichment of beneficial rhizosphere microbes in Chinese wheat yellow mosaic virus-resistant cultivars – Chuanfa Wu – Applied Microbiology and Biotechnology

Unexpected diversity among small-scale sample replicates of defined plant root compartments – Sally Attia – The ISME Journal

Microbiome analysis methods

Microbial enrichment and storage for metagenomics of vaginal, skin, and saliva samples – Sarah Ahannach – iScience

An integrated workflow for enhanced taxonomic and functional coverage of the mouse fecal metaproteome – Nicolas Nalpas – Gut Microbes

Improved Metabolite Prediction Using Microbiome Data-Based Elastic Net Models – Jialiu Xie – Frontiers in Cellular and Infection Microbiology

OtherEvaluation of Effects of Laboratory Disinfectants on Mouse Gut Microbiota – Joseph D Sciurba – Comparative Medicine

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