Greetings from Santiago, Chile! Today, in this Digest we have several reviews about microbiota and different conditions or interventions. We have also papers about the microbial evolution and its relationship with the host, the role of O-glycosylated mucus, the microbiome of neonates and the influence of probiotics, and more…
Human and General Microbiome
Review: The gut microbiota-brain axis in behaviour and brain disorders – Livia H. Morais – Nature Reviews Microbiology
Review: Gut microbiota in pancreatic diseases: possible new therapeutic strategies – Li-long Pan – Acta Pharmacologica Sinica
Review: The Gut Microbiome and the Triple Environmental Hit Concept of Inflammatory Bowel Disease Pathogenesis – Richard Kellermayer – Journal of Pediatric Gastroenterology and Nutrition
Review: Allogenic stem cell transplant-associated acute graft versus host disease: a computational drug discovery text mining approach using oral and gut microbiome signatures – M. F. Beckman – Supportive Care in Cancer
Experimental evolution makes microbes more cooperative with their local host genotype – Rebecca T. Batstone – Science
Proximal colon-derived O-glycosylated mucus encapsulates and modulates the microbiota – Kirk Bergstrom – Science
The Microbiota Profile in Inflamed and Non-Inflamed Ileal Pouch-Anal Anastomosis – Sabrina Just Kousgaard – Microorganisms (MDPI)
Altered Gut Microbiome and Environmental Factors Associated with Development of Eczema in Hong Kong Infants: A 4-Month Pilot Study – Carmen Wing Han Chan – International Journal of Environmental Research and Public Health
Beneficial microbes and Compounds
Systematic Review: The role of pro-, pre- and symbiotics in cancer: A systematic review – Miarons Marta – Journal of Clinical Pharmacy and Therapeutics
Review: Fiber and Prebiotic Interventions in Pediatric Inflammatory Bowel Disease: What Role Does the Gut Microbiome Play? – Genelle R. Healey – Nutrients (MDPI)
Influence of probiotic supplementation on the developing microbiota in human preterm neonates – Niels van Best – Gut Microbes
Anti-Inflammatory and Intestinal Microbiota Modulation Properties of Jinxiang Garlic ( Allium sativum L.) Polysaccharides toward Dextran Sodium Sulfate-Induced Colitis – Xin Shao – Journal of Agricultural and Food Chemistry
Food Microbiome
Metagenomic characterization of bacterial community and antibiotic resistance genes in representative ready-to-eat food in southern China – YiMing Li – Scientific Reports
Animal Microbiome
Review: Toxin Degradation by Rumen Microorganisms: A Review – Zhi Hung Loh – Toxins (MDPI)
Gut dysbiosis associated with the rats’ responses in methamphetamine-induced conditioned place preference – Cheng Yang – Addiction Biology
A High-Fat Diet Increases Gut Microbiota Biodiversity and Energy Expenditure Due to Nutrient Difference – Botao Wang – Nutrients (MDPI)
Plant Microbiome
Microbiome-wide association studies reveal correlations between the structure and metabolism of the rhizosphere microbiome and disease resistance in cassava – Lin Zhang – Plant Biotechnology Journal
Daring to be differential: metabarcoding analysis of soil and plant-related microbial communities using amplicon sequence variants and operational taxonomical units – Lisa Joos – BMC Genomics
Bioinformatics
Clustering on Human Microbiome Sequencing Data: A Distance-Based Unsupervised Learning Model – Dongyang Yang – Microorganisms (MDPI)
A generalized machine-learning aided method for targeted identification of industrial enzymes from metagenome: a xylanase temperature dependence case study – Mehdi Foroozandeh Shahraki – Biotechnology and Bioengeenering
