Human and General Microbiome

A Sedentary Lifestyle Changes the Composition and Predicted Functions of the Gut Bacterial and Fungal Microbiota of Subjects from the Same Company – Longwei Xu – Current Microbiology

Animal Microbiome

Effect of urbanization and parasitism on the gut microbiota of Darwin’s finch nestlings – Gabrielle Solomon – Molecular Ecology

Metabarcoding using nanopore long-read sequencing for the unbiased characterization of apicomplexan haemoparasites – Lucas G Huggins – Molecular Ecology Resources

Bacterial networks in Atlantic salmon with Piscirickettsiosis – Yoandy Coca – Scientific Reports

Metagenomic analysis reveals a dynamic microbiome with diversified adaptive functions that respond to ovulation regulation in the mouse endometrium – Sisi Pu – BMC Genomics

Beneficial Microbes, Foods and Compounds

Probiotic-fermented tomato alleviates high-fat diet-induced obesity in mice: Insights from microbiome and metabolomics – Benliang Wei – Food Chemistry

Lactobacillus rhamnosus Modulates Lung Inflammation and Mitigates Gut Dysbiosis in a Murine Model of Asthma-COPD Overlap Syndrome – Jéssica Aparecida Vasconcelos – Probiotics and Antimicrobial Proteins

Fermented Goat’s Milk Contributes to the Recovery of Iron Deficiency Anemia via Modulation of the Gut Microbiome – Ana Soriano-Lerma – Journal of Agricultural and Food Chemistry

Environmental Microbiome

Coexistence of specialist and generalist species within mixed plastic derivative-utilizing microbial communities – Laura Schaerer – Microbiome

Review: A critical review of the recent trends in source tracing of microplastics in the environment – Kiruthika K M – Environmental Research

Keystone taxa of phoD-harboring bacteria mediate alkaline phosphatase activity during biochar remediation of Cd-contaminated soil – Qiang Wang – The Science of the Total Environment

Plant Microbiome

Maintaining beneficial alga-associated bacterial communities under heat stress: Insights from controlled co-culture experiments using antibiotic-resistant bacterial strains – Elham Karimi – FEMS Microbiology Ecology

Review: Deep discovery informs difficult deployment in plant microbiome science – Dor Russ – Cell

Highlights: Plant cell wall component induced bacterial development – Ákos T Kovács – Trends in Microbiology

Microbiome Analysis: Tools, Techniques and Resources

MGS2AMR: a gene-centric mining of metagenomic sequencing data for pathogens and their antimicrobial resistance profile – Pieter-Jan Van Camp – Microbiome

Subgroup Identification Using Virtual Twins for Human Microbiome Studies – Hyunwook Koh – IEEE/ACM Transactions on Computational Biology and Bioinformatics