Today’s digest features the BugSigDB, AMPSphere and more. Also, you can check out my tips for online conferencing and how to do it better. See you at #MVIF next week!
Respiratory microbiome
The landscape of antibiotic resistance genes in the nasopharynx of preterm infants: Prolonged signature of hospitalization and effects by antibiotics – Achal Dhariwal – bioRxiv
Breast cancer microbiome
Integrating current analyses of the breast cancer microbiome – Sidra Sohail and Michael B. Burns – Plos One
Vaginal microbiome
Diet influences community dynamics following vaginal group B Streptococcus colonization – Christina J. Megli – bioRxiv
Gut microbiome
Gut microbes exacerbate systemic inflammation and behavior disorders in neurologic disease CADASIL – Sheng Liu – Microbiome
Water microbiome
Exploring novel alkane-degradation pathways in uncultured bacteria from the North Atlantic Ocean – Mirna Vázquez Rosas Landa – mSystems
Insect microbiome
Plastics shape the black soldier fly larvae gut microbiome and select for biodegrading functions – Francesca De Filippis – Microbiome
Animal experiment
Enhancing Recovery from Gut Microbiome Dysbiosis and Alleviating DSS-Induced Colitis in Mice with a Consortium of Rare Short-Chain Fatty Acid-Producing Bacteria – Achuthan Ambat – bioRxiv
Bioinformatics
BugSigDB captures patterns of differential abundance across a broad range of host-associated microbial signatures – Ludwig Geistlinger – Nature Biotechnology
Computational exploration of the global microbiome for antibiotic discovery – Célio Dias Santos-Júnior – bioRxiv
Microbiome Digest - Bik's Picks 