General microbiome

Macrophages in Microbial Pathogenesis: Commonalities of Defense Evasion Mechanisms – Pandey et al. – Infection and Immunity

Human respiratory microbiome

The Influence of FUT2 and FUT3 Polymorphisms and Nasopharyngeal Microbiome on Respiratory Infections in Breastfed Bangladeshi Infants from the Microbiota and Health Study – Binia et al. – mSphere

Human gut microbiome

Fecal Microbiota Transplantation Commonly Failed in Children with Co-Morbidities – Kellermayer et al. – JPGN

Current and future applications of fecal microbiota transplantation for children – Chen & Chiu – Biomedical Journal

[REVIEW]Microbial influences on gut development and gut-brain communication – Ye & Rawls – Development

Characterization and predictive functional profiles on metagenomic 16S rRNA data of liver transplant recipients: A longitudinal study – Sivaraj et al. – Clinical Transplantation

Changes to human faecal microbiota after international travel – Kampmann et al. – Travel Medicine and Infectious Disease

Animal experiments

Cognate recognition of microbial antigens defines constricted CD4+ T cell receptor repertoires in the inflamed colon – Muschaweck et al. – Immunity

An aniline-substituted bile salt analog protects both mice and hamsters from multiple Clostridioides difficile strains – Phan et al. – Antimicrobial Agents and Chemotherapy

Analysis of Cow-Calf Microbiome Transfer Routes and Microbiome Diversity in the Newborn Holstein Dairy Calf Hindgut – Zhu et al. – Frontiers in Nutrition

Metabolome

Multi-omic evaluation of metabolic alterations in multiple sclerosis identifies shifts in aromatic amino acid metabolism – Fitzgerald et al. – Cell Reports Medicine

Bioinformatics

[REVIEW]It takes guts to learn: machine learning techniques for disease detection from the gut microbiome – Curry, Nute & Treangen – Emerging Topics in Life Sciences