August 11, 2020

Human oral microbiome

A novel, simple, frequent oral cleaning method reduces damaging bacteria in the dental microbiota – Chhaliyil et al. – Journal of International Society of Preventive & Community Dentistry

Human gut microbiome

Rapid-Eye-Movement Sleep Behavior Disorder Exhibits Similar but Distinct Gut Dysbiosis Compared to Parkinson’s Disease – Nishiwaki et al. – bioRxiv

The Relationship between Choline Bioavailability from Diet, Intestinal Microbiota Composition, and Its Modulation of Human Diseases – Arias et al. – Nutrients.

Human fecal microbiome

Fecal microRNAs as Innovative Biomarkers of Intestinal Diseases and Effective Players in Host-Microbiome Interactions – Sashar et al. – Cancers

Animal experiments

An ambient temperature collection and stabilization strategy for canine microbiota studies – Lin et al. – Scientific Reports

Animal microbiome

Oral and vaginal microbiota in selected field mice of the genus Apodemus: a wild population study – Matějková et al. – Scientific Reports

Food microbiology

Barrel-Induced Variation in the Microbiome and Mycobiome of Aged Sour Ale and Imperial Porter Beer – Shayevitz et al. – Journal of the American Society of Brewing Chemist

Plant, root and soil microbiome

Influence of invasive earthworms (Amynthas spp.) on Wisconsin forest soil microbial communities and soil chemistry – Price-Christenson et al. – Soil Biology and Biochemestry

Field Exploitation of Multiple Functions of Beneficial Microorganisms for Plant Nutrition and Protection: Real Possibility or Just a Hope? – Kowalska et al. – Frontier in Microbiology

Composition and activity of nitrifier communities in soil are unresponsive to elevated temperature and CO2, but strongly affected by drought – Seneca et al. – The ISME journal

Environmental microbiome

Effects of the inoculum source, electron donor, and immobilization on the microbial community of sulfidogenic bioreactors – Marçal Ferraz et al. – Chemical Engineering Journal

Cryptic fungal diversity revealed in deep-sea sediments associated with whale-fall chemosynthetic ecosystems – Nagano et al. – Mycology

Bioinformatics

A survey on predicting microbe-disease associations: biological data and computational methods – Wen et al. – Briefings in Bioinoformatics

FORENSIC: an Online Platform for Fecal Source Identification – Roguet et al. – mSystems

Techniques

Bacterial mock communities as standards for reproducible cytometric microbiome analysis – Cichocki et al. – Nature Protocols

Pikes peak – Rocky Mountain National Park, Colorado. (August 02, 2020).

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