May 3, 2020

COVID19
Preprint: Lack of Reinfection in Rhesus Macaques Infected with SARS-CoV-2 – Bao – Biorxiv

Events and jobs

Call for papers: BMC Health Policy and the Management of Antimicrobial Resistance in LMICs

Pregnancy and early life

Hospital Regimens Including Probiotics Guide the Individual Development of the Gut Microbiome of Very Low Birth Weight Infants in the First Two Weeks of Life – Kurath-Koller – Nutrients

Maternal H. pylori is associated with differential fecal microbiota in infants born by vaginal delivery – Hernandez – Scientific Reports


Human gut microbiome

Review: The link between autism spectrum disorder and gut microbiota: A scoping review – Nitschke – Autism


Intestinal Dysbiosis in Carriers of Carbapenem-Resistant Enterobacteriaceae – Korach-Rechtman – mSphere

Human oral microbiome
Review: Oral microbiome: possible harbinger for children’s health – Xiao – International Journal of Oral Science

Animal experiments

Komagataeibacter hansenii CGMCC 3917 Alleviates Alcohol-Induced Liver Injury by Regulating Fatty Acid Metabolism and Intestinal Microbiota Diversity in Mice – Lin – Royal Society of Chemistry


Putting the microbiota to work: Epigenetic effects of early life antibiotic treatment are associated with immune-related pathways and reduced epithelial necrosis following Salmonella Typhimurium challenge in vitro – Costa – PlosOne


Combined Prebiotic and Microbial Intervention Improves Oral Cholera Vaccination Responses in a Mouse Model of Childhood Undernutrition – Di Luccia – Cell Host & Microbe

Animal microbiome

Establishment and Stability of the Murine Oral Microbiome – Abusleme – Journal of Dental Research

Effect of stocking density and effective fiber on the ruminal bacterial communities in lactating Holstein cows – Clemmons – PeerJ

Plant, root, and soil microbiome

Long-term continuously monocropped peanut significantly changed the abundance and composition of soil bacterial communities – Chen – PeerJ


Compared to conventional, ecological intensive management promotes beneficial proteolytic soil microbial communities for agro-ecosystem functioning under climate change-induced rain regimes – Lori – Scientific Reports


Organic mulching positively regulates the soil microbial communities and ecosystem functions in tea plantation – Zhang – BMC Microbiology

Water and extremophile microbiome (sea, rivers, lakes, glaciers, permafrost, high-salt)

Aequorivita sinensis sp. nov., isolated from sediment of the East China Sea, and reclassification of Vitellibacter todarodis as Aequorivita todarodis comb. nov. and Vitellibacter aquimaris as Aequorivita aquimaris comb. nov. – Wang – Microbiology Society


Bioprospecting and characterization of pigmented halophilic archaeal strains from Algerian hypersaline environments with analysis of carotenoids produced by Halorubrum sp. BS2 – Sahli – Journal of Basic Microbiology


Effects of a deep-sea mining experiment on seafloor microbial communities and functions after 26 years – Vonnahme – Science Advances

Food microbiology

Review: Traditionally fermented pickles: How the microbial diversity associated with their nutritional and health benefits? – Behera – Journal of Functional Foods

Bioinformatics

Incorporating Phylogenetic Information in Microbiome Differential Abundance Studies Has No Effect on Detection Power and FDR Control – Bichat – Frontiers in Microbiology


Techniques
Preprint: Freshwater monitoring by nanopore sequencing – Urban – Biorxiv

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