March 18, 2019

Good morning everyone! In today’s microbiome digest, we have a limited number of articles including reviews, studies and meeting report about the role of microbiome in various health and disease including Atopic Dermatitis, microbiome as a therapeutic target. And many more. Enjoy reading.

General microbiome

Exploring the impacts of raw materials and environments on the microbiota in Chinese Daqu starter – Hai Du – International Journal of Food Microbiology

Review: Microbiome diurnal rhythmicity and its impact on host physiology and disease risk – Samuel Philip Nobs – EMBO reports

Gut microbiome

Unconjugated and secondary bile acid profiles in response to higher-fat, lower-carbohydrate diet and associated with related gut microbiota: A 6-month randomized controlled-feeding trial – Yi Wan – Clinical Nutrition

Meeting report: Exploring human host–microbiome interactions in health and disease—how to not get lost in translation – Sarah Lebeer – Genome Biology

Interactions between a pathogenic Blastocystissubtype and gut microbiota: in vitro and in vivo studies – John Anthony Yason – Microbiome

Review: Intestinal microbiome as a novel therapeutic target for local and systemic inflammation – KazuhikoUchiyama – Pharmacology & Therapeutics

The Role of Probiotics and Prebiotics in the Prevention and Treatment of ObesityTomás Cerdo – Nutrients

Skin microbiome

Host-microbial Dialogues in Atopic Dermatitis – Tetsuro Kobayashi – International immunology

Animal microbiome / Animal experiments

Effect of different challenge models to induce necrotic enteritis on the growth performance and intestinal microbiota of broiler chickens – C Bortoluzzi – Poultry Science

The Effect of Inulin on Lifespan, Related Gene Expression and Gut Microbiota in InRp5545/TM3 Mutant Drosophila melanogaster: A Preliminary Study – Yuling Dong – Nutrients


Streaming histogram sketching for rapid microbiome analytics – Will PM Rowe – Microbiome

Modelling microbiome recovery after antibiotics using a stability landscape framework – Shaw LP – ISME Journal

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