Good morning everyone, in today’s digest we have several interesting research articles including the role of microbiome in ovarian carcinoma, pediatric atopic dermatitis, lung cancer, review articles focusing on the gut microbiome and Energy Homeostasis, interplay between microbiome and immune system, gut microbiome in cardiovascular disease, microbiome in oral cancer, a method for simulating metagenomes and microbial communities, and a very interesting work focusing the role of host and microbiome on drug response. Enjoy reading.

General microbiome

Haemolymph microbiome of the cultured spiny lobster Panulirus ornatus at different temperatures – Mei C. Ooi – Scientific Reports

The biodiversity Composition of Microbiome in Ovarian Carcinoma Patients – Bo Zhou – Scientific Reports

Environmental sources of bacteria and genetic variation in behavior influence host-associated microbiota – Alexandra A. Mushegian – Applied and Environmental Microbiology

Review: Gut Microbiota and Energy Homeostasis in Fish – Robyn Lisa Butt – Frontiers in Endocrinology

Visualizing microbiome–immune system interplay – Janet C Siebert – Immunotherapy

Gut microbiome

Comparative analysis of the gut microbiota in centenarians and young adults shows a common signature across genotypically non-related populations – Ngangyola Tuikhar – Mechanisms of Ageing and Development

Influence of proton pump inhibitors on microbiota in chronic liver disease patients – Kenta Yamamoto – Hepatology International

Review: Gut microbiota: A new protagonist in the risk of cardiovascular disease? – Antonio García-Ríos – Clínica e Investigación en Arteriosclerosis

Gut microbiota community characteristics and disease-related microorganism pattern in a population of healthy Chinese people – Wen Zhang – Scientific Reports

Primer: Evolutionary change in the human gut microbiome: From a static to a dynamic view – Isabel Gordo – PLOS Biology

Selecting a Single Stereocenter: The Molecular Nuances that Differentiate β-Hexuronidases in the Human Gut Microbiome – Pellock, Samuel J – Biochemistry

Mining the Core Gut Microbiome from a Sample Indian Population – Abhijit S. Kulkarni – Indian Journal of Microbiology

Skin and respiratory microbiome

The nasal and skin microbiome are associated with disease severity in pediatric atopic dermatitis – J.E.E. Totte – British Journal of Dermatology banner

The microbiome in lung cancer tissue and recurrence-free survival – Brandilyn A Peters – Cancer Epidemiology, Biomarkers & Prevention

Microbiome dysbiosis is associated with disease duration and increased inflammatory gene expression in systemic sclerosis skin – Michael E. Johnson – Arthritis Research and Therapy

Oral microbiome

Review: The microbiome and oral cancer: More questions than answers – Claire M. Healy – Oral Oncology

Plant microbiome

Metabarcoding reveals that rhizospheric microbiota of Quercus pyrenaica is composed by a relatively small number of bacterial taxa highly abundant – Ana V. Lasa – Scientific Reports

Review: Green Technology: Bacteria-Based Approach Could Lead to Unsuspected Microbe–Plant–Animal Interactions – Daniela Bulgari – Microorganisms

Microbial diversity and bioremediation of rhizospheric soils from Trindade Island – Brazil – Celia Marcela Camacho-Montealegre – Journal of Environmental Management

Animal experiments

Testosterone disruptor effect and gut microbiome perturbation in mice: Early life exposure to doxycycline – Xiang Hou – Chemosphere

MLKL deficiency inhibits DSS-induced colitis independent of intestinal microbiota – Jie Zhang – Molecular Immunology

JinQi Jiangtang Tablet Regulates Gut Microbiota and Improve Insulin Sensitivity in Type 2 Diabetes Mice – Ying Cao – Journal of Diabetes Research

Microbiome and drug metabolism

Separating host and microbiome contributions to drug pharmacokinetics and toxicity – Michael Zimmermann – Science

Bioinformatics

CAMISIM: simulating metagenomes and microbial communities – Adrian Fritz – Microbiome

Microbes in News

Depressed? Your Gut Microbiome Might Be to Blame