November 24, 2018

In today’s microbiome digest there are various papers on human, animal and plant microbiome specifically the microbiome of coral, Honey Bee, Welsh Mountain ponies, root and rhizosphere. Enjoy reading.

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Senior Bioinformatics Scientist, Microbiome

General microbiome

Essay: Microbiome dynamics in obesity – Christoph A. Thaiss – Science

Human microbiome diversity: implications in health, disease, and applications – Kathryn J. Pflughoeft – Annual Reviews

Gut microbiome

Review: Gut microbiota and aging – Francesca Mangiola – European Review for Medical and Pharmacological Sciences

Review: Microbial community reshaped in gastric cancer – L.-L. Wang – European Review for Medical and Pharmacological Sciences

Differential clustering of faecal and mucosa‐associated microbiota in healthy individuals – Adam Carstens – Journal of Digestive Diseases

The prevalence and transcriptional activity of the mucosal microbiota of ulcerative colitis patients – Aina E. Fossum Moen – Scientific Reports

Skin microbiome

The Influence of Habitat and Phylogeny on the Skin Microbiome of Amphibians in Guatemala and Mexico – Silas Ellison – Microbial Ecology

Respiratory microbiome

Inhaled nanomaterials and the respiratory microbiome: clinical, immunological and toxicological perspectives – Tuang Yeow Poh – Particle and Fibre Toxicology

Animal experiments

An intermittent hypercaloric diet alters gut microbiota, prefrontal cortical gene expression and social behaviours in rats – Reichelt AC – Nutritional Neuroscience

Animal microbiome

Coral-associated bacteria demonstrate phylosymbiosis and cophylogeny – F. Joseph Pollock – Nature Communications

Gut and Whole-Body Microbiota of the Honey Bee Separate Thriving and Non-thriving Hives – Céline Ribière – Microbial Ecology

Gut microbiome composition is associated with spatial structuring and social interactions in semi-feral Welsh Mountain ponies – Rachael E. Antwis – Microbiome

Plant, root, and soil microbiome

The structure and function of the global citrus rhizosphere microbiome – Jin Xu – Nature Communications

Root microbiome response to treated wastewater irrigation – AvihaiZolti – Science of The Total Environment

Water and extremophile microbiome

New archaeal viruses discovered by metagenomic analysis of viral communities in enrichment cultures – Ying Liu – Environmental Microbiology

Probiotics / prebiotics

Review: Probiotics, prebiotics and synbiotics for weight loss and metabolic syndrome in the microbiome era – R. Ferrarese – European Review for Medical and Pharmacological Sciences

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