December 9, 2017

Do you want to know what microbes are in the international space station? the effects of Arsenic exposure on childrens microbiomes? or perhaps you are interested in tree leaf bacterial diversity along an urban gradient?  Well, today we have it all and more! Enjoy Saturdays microbiome digest for links to the latest research on microbiomes.


General microbiome

Microbial Ecology: Community Coalescence Stirs Things Up – Matthias C. Rillig – Current Biology

Multi-site human microbiome

Distinct fecal and oral microbiota composition in human type 1 diabetes, an observational study – Pieter F. de Groot – PlosONE

Human skin microbiome

The role of the skin microbiome in atopic dermatitis: a systematic review – R.D. Bjerre – British Journal of Dermatology

Human gut microbiome

Preprint: Comparison of Small Gut and Whole Gut Microbiota of First-Degree Relatives with Adult Patients with Celiac Disease and Controls – Sudarshan A Shetty et al – BioRxiv

Delivery Mode and the Transition of Pioneering Gut-Microbiota Structure, Composition and Predicted Metabolic Function – Noel T. Mueller et al – Genes

Correlations between gut microbiota community structures of Tibetans and geography – Daoliang Lan et al – Scientific Reports

Arsenic exposure and intestinal microbiota in children from Sirajdikhan, Bangladesh – Xiaoxi Dong – PlosONE

The role of gut microbiota in the modulation of drug action: A focus on some clinically significant issues – Diego Currò – Expert Review of Clinical Pharmacology

Review: Codevelopment of Microbiota and Innate Immunity and the Risk for Group B Streptococcal Disease – Julia Kolter – Frontiers in Immunology

Animal experiments

Glucerabacter canisensis gen. nov., sp. nov., isolated from dog feces and its effect on the hydrolysis of plant glucosylceramide in the intestine of dogs – Misho Kawata et al – Archives of Microbiology

Meta-Analysis of Fecal Microbiota and Metabolites in Experimental Colitic Mice during the Inflammatory and Healing Phases – Toshifumi Osaka – Nutrients

Animal microbiome

Hierarchical social networks shape gut microbial composition in wild Verreaux’s sifaka – Amanda C. Perofsky – Proceedings of the Royal Society B

Plant, root, and soil microbiome

Tree Leaf Bacterial Community Structure and Diversity Differ along a Gradient of Urban Intensity – Isabelle Laforest-Lapointe – mSystems

Microbial and Plant-Assisted Bioremediation of Heavy Metal Polluted Environments: A Review – Omena Bernard Ojuederie and Olubukola Oluranti Babalola – International Journal of Environmental Research and Public Health

Soil microbial communities of three grassland ecosystems in the Bayinbuluke, China – Keqiang Shao – Canadian Journal of Microbiology

Response of soil microbial community dynamics to Robinia pseudoacacia L. afforestation in the loess plateau: a chronosequence approach – Jinliang Liu – Plant and Soil

Microbes in space

A microbial survey of the International Space Station – Jenna M. Lang et al – PeerJ

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