July 30, 2017

Relax into your Sunday and read through the days new microbiome research


Events and jobs

Laboratory Technician-Microbiology – Wilmington, DE

Pregnancy and early life

Maternal modifiers of the infant gut microbiota: metabolic consequences – Christopher M Mulligan – Journal of Endocrinology

Human respiratory microbiome

Composition and abundance of microbiota in the pharynx in patients with laryngeal carcinoma and vocal cord polyps – Hongli Gong – Journal of Microbiology

Human gut microbiome

Quantitative metagenomics reveals unique gut microbiome biomarkers in ankylosing spondylitis – Chengping Wen – Genome Biology

Persistent diarrhea: A persistent infection with enteropathogens or a gut commensal dysbiosis? – Shafiqul A. Sarker – Environmental Microbiology

Reproducibility of assessing fecal microbiota in chronic constipation – G. Parthasarathy – Neurogastroenterology & Motility

Effects of mushroom consumption on the microbiota of different target groups – Impact of polyphenolic composition and mitigation on the microbiome fingerprint – Emanuel Vamanu – LWT – Food Science and Technology

Shotgun metagenomic data on the human stool samples to characterize shifts of the gut microbial profile after the Helicobacter pylori eradication therapy – Eugenia A. Boulygina – Data in Brief

Review: Strategies to increase the efficacy of using gut microbiota for the modulation of obesity – J. Li – Obesity Reviews

Animal experiments 

Amino acid metabolic signaling influences Aedes aegypti midgut microbiome variability – Sarah M. Short – PLOS One

Differential intestinal anti-inflammatory effects of Lactobacillus fermentum and Lactobacillus salivarius in DSS mouse colitis: impact on microRNAs expression and microbiota composition – Alba Rodríguez-Nogales – Molecular Nutrition & Food Research

Animal microbiome

Links between Natural Variation in the Microbiome and Host Fitness in Wild Mammals – Taichi A. Suzuki – Integrative and Comparative Biology

Captivity Shapes the Gut Microbiota of Andean Bears: Insights into Health Surveillance – Andrea Borbón-García – Frontiers in Microbiology

Microbiomes of American Oysters (Crassostrea virginica) Harvested from Two Sites in the Chesapeake Bay – Sylvia Ossai – Genome Announcements

Rumen Microbiome, Probiotics, and Fermentation Additives – Joshua C. McCann – Veterinary Clinics of North America: Food Animal Practice

Plant, root, and soil microbiome

Assessing the influence of farm fertility amendments, field management, and sorghum genotypes on soil microbial communities and grain quality – Adam B. Cobb – Applied Soil Ecology

Rhizospheric Microbiome Profiling of Capsicum annuum L. Cultivated in Amended Soils by 16S and Internal Transcribed Spacer 2 rRNA Amplicon Metagenome Sequencing – Ali Asaff-Torres – Genome Announcements

Peaks of in situ N2O emissions are influenced by N2O producing and reducing microbial communities across arable soils – L.A Domeignoz-Horta – Global Change Biology

Eelgrass Leaf Surface Microbiomes Are Locally Variable and Highly Correlated with Epibiotic Eukaryotes – Mia M. Bengtsson – Frontiers in Microbiology

Microbial community structure is affected by cropping sequences and poultry litter under long-term no-tillage – A.J. Ashworth – Soil Biology and Biochemistry

Interaction of microorganisms within leafy green phyllospheres: Where do human noroviruses fit in? – Wenjun Deng – International Journal of Food Microbiology

Water and extremophile microbiome

Spatial and Temporal Microbial Patterns in a Tropical Macrotidal Estuary Subject to Urbanization – Mirjam Kaestli – Frontiers in Microbiology

Evidence of microbial rhodopsins in Antarctic Dry Valley edaphic systems – Leandro D. Guerrero – Environmental Microbiology

Prokaryotic diversity and community composition in the Salar de Uyuni, a large scale, chaotropic salt flat – Sergio S. Rubin – Environmental Microbiology

Fate of antibiotic resistance genes and their associations with bacterial community in livestock breeding wastewater and its receiving river water – Shuyu Jia – Water Research

Performance and microbial community analysis of a microaerophilic sulfate and nitrate co-reduction system – Xi-Jun Xu – Chemical Engineering Journal

Characteristics of microbial community functional structure of a biological coking wastewater treatment system – Dev Raj Joshi – Journal of Environmental Sciences

Food microbiology

Evolution of microbial community and chemical properties of a sourdough during the production of Colomba, an Italian sweet leavened baked product – Stefano Raimondi – LWT – Food Science and Technology

Bacterial community diversity of traditional fermented vegetables in China – Daqun Liu – LWT – Food Science and Technology

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