May 3, 2017

Pregnancy and early life

Development of the cutaneous microbiome in the preterm infant: A prospective longitudinal study
Mohan Pammi et al. PLoS One

Human respiratory microbiome

The presence of bacterial microcolonies on the maxillary sinus ciliary epithelium in healthy young individuals
Monika Morawska-Kochman et al. PLoS One

Human gut microbiome

Review of mechanisms of deoxynivalenol-induced anorexia: The role of gut microbiota
Zhao Peng et al – JOURNAL OF APPLIED TOXICOLOGY

Probiotics are a good choice in remission of inflammatory bowel diseases: A meta analysis and systematic review
Mahboube Ganji-Arjenaki et al – JOURNAL OF CELLULAR PHYSIOLOGY

Differences in gut microbial composition correlate with regional brain volumes in irritable bowel syndrome.
Labus JS et al – Microbiome

The shrinking human gut microbiome.
Moeller AH. – Curr Opin Microbio

Animal experiments

Maternal obese-type gut microbiota differentially impact cognition, anxiety and compulsive behavior in male and female offspring in mice

Jing Chen et al. PLoS One

 

Dysbiosis of intestinal microbiota and decrease in paneth cell antimicrobial peptide level during acute necrotizing pancreatitis in rats
Annadora J. et al . PLoS One

Animal microbiome

Bacterial microbiome of the nose of healthy dogs and dogs with nasal disease
Barbara Tress, et al . PLoS One
Characterization of the fecal microbiome during neonatal and early pediatric development in puppies
Blake C. Guard et al. PLoS One

Effects of Saccharomyces cerevisiae fermentation products on dairy calves: Ruminal fermentation, gastrointestinal morphology, and microbial community.
Xiao JX et al – J Diary Sci

Studies on bacterial community composition are affected by the time and storage method of the rumen content
Yury Tatiana Granja-Salcedo et al. PLoS One

Competition drives the response of soil microbial diversity to increased grazing by vertebrate herbivores.
Eldridge DJ et al – Ecology

Diversity of culturable bacterial communities in the intestinal tracts of goldfish (Carassius auratus) and their ability to produce N-acyl homoserine lactone.
Sugita H et al – Folia Microbiol

 

Water and extremophile microbiome (sea, rivers, lakes, glaciers, permafrost, high-salt)

Crude oil impairs immune function and increases susceptibility to pathogenic bacteria in southern flounder
Keith M. Bayha et al. PLoS One

Pyrosequencing reveals microbial community dynamics in integrated simultaneous desulfurization and denitrification process at different influent nitrate concentrations.
Chen C et al – Chemosphere

 

Bioinformatics

Abundance profiling of specific gene groups using precomputed gut metagenomes yields novel biological hypotheses
Konstantin Yarygin et al. PLoS One

Evaluation of the reproducibility of amplicon sequencing with Illumina MiSeq platform
Chongqing Wen et al. PLoS One

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