Reanalysis of plaque microbiome using Minimum Entropy Decomposition, decomposing cow dung, antimicrobial peptides in Drosophila, and distinct microbiomes in US landfills.
Human oral microbiome
Individuality, Stability, and Variability of the Plaque Microbiome – Daniel R. Utter – Frontiers in Microbiology
Human gut microbiome
Long-term changes of bacterial and viral compositions in the intestine of a recovered Clostridium difficile patient after fecal microbiota transplantation – Felix Broecker – Cold Spring Harbor Molecular Case Studies
Colonization with the enteric protozoa Blastocystis is associated with increased diversity of human gut bacterial microbiota – Christophe Audebert – Scientific Reports
Not sure what is novel here: Characterization of the Gut Microbiome Using 16S or Shotgun Metagenomics – Juan Jovel – Frontiers in Microbiology
Review: Local and Long-Distance Calling: Conversations between the Gut Microbiota and Intra- and Extra-Gastrointestinal Tract Infections – Joshua E. Denny – Frontiers in Cellular and Infection Microbiology
Animal and in vitro experiments
Selection of Lactobacillus strains as potential probiotics for vaginitis treatment
– Carolina M. A. Santos – Microbiology
Nod2 deficiency leads to a specific and transmissible mucosa-associated microbial dysbiosis which is independent of the mucosal barrier defect – Ziad Al Nabhani – Journal of Crohn’s and Colitis
The bacteriocin bactofencin A subtly modulates gut microbial populations – Caitriona M. Guinane – Anaerobe
Intestinal microecology associated with fluoride resistance capability of the silkworm (Bombyx mori L.) – Guan-Nan Li – Applied Microbiology and Biotechnology
Animal microbiome
Rapid Microbiome Changes in Freshly Deposited Cow Feces under Field Conditions –
Kelvin Wong – Frontiers in Microbiology
Microbial Diversity in the Gut of Cashew Stem Girdler, Analeptes trifasciata Fabricius (Coleoptera: Cerambycidae), in Ibadan, Nigeria – A.V. Oyedokun – International Journal of Insect Science
Includes eukaryotic microbes: Please mind the gap – Visual census and cryptic biodiversity assessment at central Red Sea coral reefs – John K. Pearman – Marine Environmental Research
Review: Friend, foe or food? Recognition and the role of antimicrobial peptides in gut immunity and Drosophila–microbe interactions – Nichole A. Broderick – Philosophical Transactions of the Royal Society B
Plant, root, and soil microbiome
Deciphering the Pathobiome: Intra- and Interkingdom Interactions Involving the Pathogen Erysiphe alphitoides – Boris Jakuschkin – Microbial Ecology
Distribution of bacterial communities across plateau freshwater lake and upslope soils – Yihui Chen – Journal of Environmental Sciences
Water microbiome
What causes the inverse relationship between primary production and export efficiency in the Southern Ocean? – Frédéric A. C. Le Moigne – Geophysical Research Letters
Waste and pollution microbiology
Municipal Solid Waste Landfills Harbor Distinct Microbiomes – Blake W. Stamps – Frontiers in Microbiology
Yeasts and fungi
Review: Invasive candidiasis: from mycobiome to infection, therapy, and prevention – L. Lagunes – European Journal of Clinical Microbiology & Infectious Diseases
Viruses and phages
Pseudo-nitzschia Challenged with Co-occurring Viral Communities Display Diverse Infection Phenotypes – Michael C. G. Carlson – Frontiers in Microbiology
Techniques
Single cell stable isotope probing in microbiology using Raman microspectroscopy – Yun Wang – Current Opinion in Biotechnology
Microbes in the news
Is Obesity Infectious? Study Suggests Our Gut Microbes Can ‘Spread’ To Others – Alyssa Navarro – Tech Times
Bik’s Picks
If Dung Beetles (Scarabaeidae: Scarabaeinae) Arose in Association with Dinosaurs, Did They Also Suffer a Mass Co-Extinction at the K-Pg Boundary? – Nicole L. Gunter – PLOS ONE