Highlights: Role of microbiome in drug response, station and train surface microbiome, fish microbiome, bioreactor based microbial communities, many more articles and some news.
General microbiome
Microbial Taxon-Specific Isotope Incorporation with DNA Quantitative Stable Isotope Probing – Stable Isotope Probing
The Role of the Microbiome in Drug Response – Rosina Pryor – Annual Review of Pharmacology and Toxicology
Station and train surface microbiomes of Mexico City’s metro (subway/underground) – Apolinar Misael Hernández – bioRxiv
Animal experiments
Alterations of the brain proteome and gut microbiota in D-galactose-induced brain aging mice with krill oil supplementation – Qinqin Jiang – ACS
Animal microbiome
Low-load pathogen spillover predicts shifts in skin microbiome and survival of a terrestrial-breeding amphibian – C. Guilherme Becker – Proceedings B
Comparative analysis of the gut microbial communities between two dominant amphipods from the Challenger Deep, Mariana Trench – Xiang-yu Cheng – Deep Sea Research Part I: Oceanographic Research Papers
A microbial sea of possibilities: current knowledge and prospects for an improved understanding of the fish microbiome – Thibault P.R.A. Legrand – Reviews in Aquaculture
The microbiota in spider mite faeces potentially reflects intestinal bacterial communities in the host – Yu‐Xi Zhu – Insect Science
Plant, root, and soil microbiome
Agroforestry alters the rhizosphere soil bacterial and fungal communities of moso bamboo plantations in subtropical China – Xiaoping Zhang – Applied Soil Ecology
Enhanced tomato plant growth in soil under reduced P supply through microbial inoculants and microbiome shifts – Namis Eltlbany – FEMS Microbiology Ecology
Microbiome in Plant Health and Disease: Challenges and Opportunities –
Exploring the Phyllosphere Bacterial Community for Improving Tree Crop Protection – Microbiome in Plant Health and Disease
Influence of the Rhizospheric Microbiome in Plant Health Management –
Circadian Rhythms in Plant-Microbe Interaction: For Better Performance of Bioinoculants in the Agricultural Fields – Biofertilizers for Sustainable Agriculture and Environment
Dynamics of the rice rhizosphere microbial community under continuous and intermittent flooding treatment – HaiLong Li – Journal of Environmental Management
Differential dynamics of microbial community networks help identify microorganisms interacting with residue-borne pathogens: the case of Zymoseptoria tritici in wheat – Lydie Kerdraon – bioRxiv
Water and extremophile microbiome
Characterization of novel metagenomic–derived lipase from Indian hot spring –
Built environment
Multi-omics analysis reveals niche and fitness differences in typical denitrification microbial aggregations – Yale Deng – Environment International
Electricity generation and microbial community of single-chamber microbial fuel cells in response to Cu2O nanoparticles/reduced graphene oxide as cathode catalyst – ShuaishuaiXin – Chemical Engineering Journal
Effects of current intensities on the performances and microbial communities in a combined bio-electrochemical and sulfur autotrophic denitrification (CBSAD) system – Hongyu Wang – Science of The Total Environment
Sustained organic loading perturbation inhibits nitrite oxidation in bioreactors unveiling variable resistance and resilience of nitrification and nitrifiers – E. Santillan – bioRxiv
Food microbiology
Characterization of the Microbial Resistome in Conventional and “Raised Without Antibiotics” Beef and Dairy Production Systems – Pablo Rovira – Frontiers in Microbiology
Transcription Profiling Reveals Cooperative Metabolic Interactions in a Microbial Cheese-Ripening Community Composed of Debaryomyces hansenii, Brevibacterium aurantiacum, and Hafnia alvei – Nguyen-Phuong PHAM – Frontiers in Microbiology
Techniques
Culture of salivary methanogens assisted by chemically produced hydrogen – CO Guindo – bioRxiv
Escherichia coli clonobiome: assessing the strains diversity in feces and urine by deep amplicon sequencing – Sofiya G. Shevchenko – bioRxiv
A new technique for use in the study of the microbiome: An evaluation of a three-dimensional cell culture technique in maintaining the gastrointestinal microbiome of four Balb/c female mice and implications for future studies – Everest Uriel Castaneda – bioRxiv
Microbes in the news
Genetic census of the human microbiome – ScienceDaily
When It Comes To Gut Health, Trust Science, Not Gimmicks – Futurism
UNSW unveils Microbiome Research Centre – What’s New in Food Technology & Manufacturing
MICROBIOME IN CHILDREN ASSOCIATED WITH MODE OF DELIVERY AT BIRTH -MedicalResearch.com
UCSF, Stanford Receive $35 Million From Marc and Lynne Benioff – PND, Candid
Antiseptic resistance in bacteria ‘could lead to next generation of plastics’ – Dumbarton Reporter