February 28, 2017

Events and jobs

Postdoctoral Fellow/Microbiology – University of Tennessee Health Science Center – Memphis, TN

QC Microbiology Analyst – Leidos – FREDERICK, MD US

General microbiome

Preprint: Getting the hologenome concept right: An eco-evolutionary framework for hosts and their microbiomes – Kevin R. Theis – bioRxiv

Preprint: Genome-wide phenotypic analysis of growth, cell morphogenesis and cell cycle events in Escherichia coli – Manuel Campos – bioRxiv

Preprint: Genomic epidemiology of global Klebsiella pneumoniae carbapenemase (KPC)-producing E. coli – Nicole Stoesser – bioRxiv

Preprint: How to name and classify your phage: an informal guide – Evelien M Adriaenssens – bioRxiv

Pregnancy and early life

Antibiotic treatment at delivery shapes the initial oral microbiome in neonates – Luisa F. Gomez-Arango – Scientific reports

Multi-site human microbiome

A randomised clinical study to determine the effect of a toothpaste containing enzymes and proteins on plaque oral microbiome ecology – S. E. Adams – Scientific reports

Human skin microbiome

Antimicrobials from human skin commensal bacteria protect against Staphylococcus aureus and are deficient in atopic dermatitis – Teruaki Nakatsuji – Science translational medicine

Human vaginal microbiome

Bacterial species colonizing the vagina of healthy women are not associated with race – May A. Beamer – Anaerobes in the microbiome

Human gut microbiome

Combined Signature of the Fecal Microbiome and Metabolome in Patients with Gout – Tiejuan Shao – Frontiers in microbiology

Review: Intestinal microbiome landscaping: insight in community assemblage and implications for microbial modulation strategies – Sudarshan A. Shetty – FEMS-Microbiology reviews

The microbiome and systemic lupus erythematosus – Nurit Katz-Agranov – Immunologic Research

Animal microbiome

Unexplored Archaeal Diversity in the Great Ape Gut Microbiome – Kasie Raymann – mSphere

Plant, root, and soil microbiome

Plant Growth Promoting Bacteria Associated with Langsdorffia hypogaea-Rhizosphere-Host Biological Interface: A Neglected Model of Bacterial Prospection – Érica B. Felestrino – Frontiers in microbiology

Structural variability and niche differentiation in the rhizosphere and endosphere bacterial microbiome of field-grown poplar trees – Bram Beckers – Microbiome

Plant cultivars imprint the rhizosphere bacterial community composition and association networks – Yuji Jiang – Soil Biology and Biochemistry

Retention and survival of E. coli in stormwater biofilters: Role of vegetation, rhizosphere microorganisms and antimicrobial filter media – G.I. Chandrasena – Ecological Engineering

Nitrogen addition shifts the microbial community in the rhizosphere of Pinus tabuliformis in Northwestern China – Fenglian Lv – PLoS ONE

Investigation of the fungal community structures of imported wheat using high-throughput sequencing technology – Shi Y – PLoS ONE

Players over the Surface: Unraveling the Role of Exopolysaccharides in Zinc Biosorption by Fluorescent Pseudomonas Strain Psd – Anamika Upadhyay – Frontiers in Microbiology
Potential microbial contamination during sampling of permafrost soil assessed by tracers – Toke Bang-Andreasen – Scientific reports

Water and extremophile microbiome

Annual community patterns are driven by seasonal switching between closely related marine bacteria – Christopher S Ward – ISME

Ubiquitous and persistent Proteobacteria and other Gram-negative bacteria in drinking water – Ivone Vaz-Moreira – Science of The Total Environment

Marine-Derived Biocatalysts: Importance, Accessing, and Application in Aromatic Pollutant Bioremediation – Efstratios Nikolaivits – Frontiers in microbiology

Marine Actinobacteria as a source of compounds for phytopathogen control: An integrative metabolic-profiling / bioactivity and taxonomical approach – Luz A. Betancur – PLoS ONE

Archaeal and bacterial communities in deep-sea hydrogenetic ferromanganese crusts on old seamounts of the northwestern Pacific – Shota Nitahara – PLoS ONE

A Proteomic Perspective on the Bacterial Adaptation to Cold: Integrating OMICs Data of the Psychrotrophic Bacterium Exiguobacterium antarcticum B7 – Rafael A. Baraúna – Proteomes

Beneficial Microorganisms for Corals (BMC): proposed mechanisms for coral health and resilience – Raquel Peixoto – Frontiers in microbiology

Science, publishing, and career

Preprint: Preprinting Microbiology – Patrick D. Schloss – bioRxiv

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